RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 HINT2Q9BX68 163 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 SLC5A7Q9GZV3 580 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 PLEKHA2Q9HB19 425 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 SEPSECSQ9HD40 501 aaKnown RBP4.05□□□□□ -1.76
CDH13-212ENST00000569144 CCDC59Q9P031 241 aaKnown RBP4.05□□□□□ -1.76
CDH13-212ENST00000569144 EXTL2Q9UBQ6 330 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 GOLT1BQ9Y3E0 138 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 HLA-DRB4X5D2U9 266 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
CDH13-212ENST00000569144 LRP1Q07954 4544 aaKnown RBP4.04□□□□□ -1.76
CDH13-212ENST00000569144 A0A1B0GU03 582 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 SMIM31A0A1B0GVY4 71 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 FAM25AB3EWG3 89 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 FAM25CB3EWG5 89 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 FAM25GB3EWG6 89 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 FAM90A26D6RGX4 464 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 F5H768 121 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 CTDSP2O14595 271 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 IGHV3-48P01763 117 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 HLA-DMAP28067 261 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 NPBWR1P48145 328 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 HERV-K104P61576 105 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 CATR1Q13166 79 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 RRN3P1Q2M238 152 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
CDH13-212ENST00000569144 ZNF114Q8NC26 417 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 OR6F1Q8NGZ6 308 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 OR51H1Q8NH63 302 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 DEFB104AQ8WTQ1 72 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 BORCS5Q969J3 196 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 NARS2Q96I59 477 aaKnown RBP4.04□□□□□ -1.76
CDH13-212ENST00000569144 ABHD1Q96SE0 405 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 ZNF2Q9BSG1 426 aaPredicted RBP4.04□□□□□ -1.76
CDH13-212ENST00000569144 AAMDCQ9H7C9 122 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 ZNF586Q9NXT0 402 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 COMMD9Q9P000 198 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 KLK11Q9UBX7 282 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 MTFP1Q9UDX5 166 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 OR51B2Q9Y5P1 312 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 FAT3Q8TDW7 4589 aa4.04□□□□□ -1.76
CDH13-212ENST00000569144 GABARAPH6UMI1 98 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 GPR31O00270 319 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 PGLYRP1O75594 196 aaPredicted RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 TMEM50AO95807 157 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 RLN1P04808 185 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 ATP5G1P05496 136 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 NKX2-1P43699 371 aaPredicted RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 ATP5G3P48201 142 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 AP2S1P53680 142 aaPredicted RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 FXYD7P58549 80 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 ERVK-16P61578 105 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 HAMPP81172 84 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 MRPS10P82664 201 aaKnown RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 AADACL3Q5VUY0 350 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 LHFPL1Q86WI0 220 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 CADM3Q8N126 398 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 C1orf158Q8N1D5 194 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 ZNF709Q8N972 641 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 SMIM4Q8WVI0 70 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 PINX1Q96BK5 328 aaKnown RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 C7orf50Q9BRJ6 194 aaKnown RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 TMEM70Q9BUB7 260 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 SLIRPQ9GZT3 109 aaKnown RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 RBM38Q9H0Z9 239 aaKnown RBP4.03□□□□□ -1.76
CDH13-212ENST00000569144 MSRB1Q9NZV6 116 aa4.03□□□□□ -1.76
CDH13-212ENST00000569144 RHODO00212 210 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 CTDSPLO15194 276 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 RGS5O15539 181 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 SNAPC5O75971 98 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 OXTP01178 125 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 IGKV3-20P01619 116 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 CD3DP04234 171 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 DEFB130BP0DP73 79 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 DEFB130AP0DP74 79 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 PSG1P11464 419 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 TBPP20226 339 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 F2RP25116 425 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 PPP5CP53041 499 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 PHLDA2Q53GA4 152 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 RNASE10Q5GAN6 216 aaKnown RBP4.02□□□□□ -1.77
CDH13-212ENST00000569144 GDF5OSQ5U4N7 250 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 CMTM1Q8IZ96 169 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 ARRDC1Q8N5I2 433 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 TMEM229BQ8NBD8 167 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 OR4D10Q8NGI6 311 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 C15orf40Q8WUR7 153 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 FCAMRQ8WWV6 532 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 MRGPRFQ96AM1 343 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 DIRAS2Q96HU8 199 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 SOSTQ9BQB4 213 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 SAV1Q9H4B6 383 aaPredicted RBP4.02□□□□□ -1.77
CDH13-212ENST00000569144 FNDC4Q9H6D8 234 aaPredicted RBP4.02□□□□□ -1.77
CDH13-212ENST00000569144 NRN1Q9NPD7 142 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 FKBP11Q9NYL4 201 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 PRNDQ9UKY0 176 aa4.02□□□□□ -1.77
CDH13-212ENST00000569144 NSG2Q9Y328 171 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms