RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MITD1Q8WV92 249 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 C20orf85Q9H1P6 137 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 SLC25A32Q9H2D1 315 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 HRH4Q9H3N8 390 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 CLEC5AQ9NY25 188 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 SLC45A2Q9UMX9 530 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 HLA-DRB4X5D2U9 266 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 ELOA3CA0A087WX78 387 aaPredicted RBP5.65□□□□□ -1.5
CDH3-209ENST00000569080 SNRPGP15A8MWD9 76 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 SSSCA1O60232 199 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 FABP1P07148 127 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 MIFP14174 115 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 GATA2P23769 480 aaPredicted RBP5.65□□□□□ -1.5
CDH3-209ENST00000569080 INPP1P49441 399 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 PSMB3P49720 205 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 RPP30P78346 268 aaKnown RBP5.65□□□□□ -1.5
CDH3-209ENST00000569080 TMEM14EPQ6UXP3 125 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 ZNF705AQ6ZN79 300 aaPredicted RBP5.65□□□□□ -1.5
CDH3-209ENST00000569080 TMEM144Q7Z5S9 345 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 ZNF709Q8N972 641 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 C11orf45Q8TAV5 145 aa5.65□□□□□ -1.5
CDH3-209ENST00000569080 PAIP2BQ9ULR5 123 aaKnown RBP5.65□□□□□ -1.5
CDH3-209ENST00000569080 STRAPQ9Y3F4 350 aaKnown RBP5.65□□□□□ -1.5
CDH3-209ENST00000569080 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 ZNF98A6NK75 572 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 A8MTW9 85 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 ZNF705FA8MVS1 300 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 H3BRN7 92 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 K7EPK0 472 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 ISLRO14498 428 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 LYRM1O43325 122 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 CFDP00746 253 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 ZNF705DP0CH99 300 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 ZNF705BP0CI00 300 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 AKR1C1Q04828 323 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 ARL16Q0P5N6 197 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 IAH1Q2TAA2 248 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 C4orf46Q504U0 113 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 FOXI2Q6ZQN5 318 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 ZBTB8BQ8NAP8 495 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 SMIM8Q96KF7 97 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 C20orf173Q96LM9 149 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 CLUHP3Q96NS8 147 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 MFFQ9GZY8 342 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 SAV1Q9H4B6 383 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 C11orf1Q9H5F2 150 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 NDUFA13Q9P0J0 144 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 FBXL17Q9UF56 701 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 TBC1D24Q9ULP9 559 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 CELA1Q9UNI1 258 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 KLK5Q9Y337 293 aaPredicted RBP5.64□□□□□ -1.51
CDH3-209ENST00000569080 HERC2O95714 4834 aa5.64□□□□□ -1.51
CDH3-209ENST00000569080 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 TRAV8-2A0A0B4J237 113 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 CENPXA8MT69 81 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 FNDC10F2Z333 226 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 F6UB75 175 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 CCSO14618 274 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 TSC22D2O75157 780 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 LY6G6CO95867 125 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 IFNA21P01568 189 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 MBPP02686 304 aaPredicted RBP5.63□□□□□ -1.51
CDH3-209ENST00000569080 TCRBP04435 133 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 METTL15P1P0C7V9 234 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 TAS2R30P59541 319 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 PLP1P60201 277 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 DLK1P80370 383 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 AMTNQ6UX39 209 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 CYP2G1PQ6ZSU1 146 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 Q6ZTC4 211 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 OR8I2Q8N0Y5 310 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 BPIFCQ8NFQ6 507 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 SHANK2-AS3Q9BTD1 123 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 CCDC32Q9BV29 185 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 SCRT1Q9BWW7 348 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 C1QTNF4Q9BXJ3 329 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 NUDT15Q9NV35 164 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 PSENENQ9NZ42 101 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 PFDN2Q9UHV9 154 aa5.63□□□□□ -1.51
CDH3-209ENST00000569080 TRAV6A0A075B6T7 132 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 A0A0J9YX75 114 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 C7orf66A4D0T2 115 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 SCGB1D2O95969 90 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 LINC00869P0C866 280 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 ORM2P19652 201 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 HLA-DMBP28068 263 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 MEOX2P50222 304 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 NUTF2P61970 127 aaKnown RBP5.62□□□□□ -1.51
CDH3-209ENST00000569080 RRAS2P62070 204 aaPredicted RBP5.62□□□□□ -1.51
CDH3-209ENST00000569080 CNPY1Q3B7I2 92 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 SAMD13Q5VXD3 122 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 LGALS9CQ6DKI2 356 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 PATE2Q6UY27 113 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 LINC00299Q6ZSB3 139 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 RPP25LQ8N5L8 163 aaKnown RBP5.62□□□□□ -1.51
CDH3-209ENST00000569080 OR1B1Q8NGR6 318 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 PPP1R14BQ96C90 147 aa5.62□□□□□ -1.51
CDH3-209ENST00000569080 LINC00052Q96N35 136 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms