RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	IGKV1-17	P01599	117 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	VAMP1	P23763	118 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	UCP1	P25874	307 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	NKX2-1	P43699	371 aa	Predicted RBP	11.77	□□□□□ -0.53
PKM-223	ENST00000569050	AP2S1	P53680	142 aa	Predicted RBP	11.77	□□□□□ -0.53
PKM-223	ENST00000569050	H2BFWT	Q7Z2G1	175 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	OR4A16	Q8NH70	328 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	LHFPL5	Q8TAF8	219 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	SEC22A	Q96IW7	307 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.77	□□□□□ -0.53
PKM-223	ENST00000569050	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.77	□□□□□ -0.53
PKM-223	ENST00000569050		Q9H8V8	135 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	NRN1	Q9NPD7	142 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050	GOLT1B	Q9Y3E0	138 aa		11.77	□□□□□ -0.53
PKM-223	ENST00000569050		J3QL48	77 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	UPK1B	O75841	260 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	NDUFB6	O95139	128 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	IGKV1-5	P01602	117 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	HSPE1	P61604	102 aa	Known RBP	11.76	□□□□□ -0.53
PKM-223	ENST00000569050	RRN3P1	Q2M238	152 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	TIGIT	Q495A1	244 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	TTC32	Q5I0X7	151 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	TMEM268	Q5VZI3	342 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	SSX7	Q7RTT5	188 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	TMEM222	Q9H0R3	208 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	SLC35B3	Q9H1N7	401 aa		11.76	□□□□□ -0.53
PKM-223	ENST00000569050	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.76	□□□□□ -0.53
PKM-223	ENST00000569050		A0A0G2JRQ6	117 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
PKM-223	ENST00000569050	SUPT4H1	P63272	117 aa	Known RBP	11.75	□□□□□ -0.53
PKM-223	ENST00000569050	PPP1R1A	Q13522	171 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050	MLANA	Q16655	118 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050	OR4X1	Q8NH49	305 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050	GLYATL2	Q8WU03	294 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050	C20orf85	Q9H1P6	137 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050		Q9H3A6	140 aa		11.75	□□□□□ -0.53
PKM-223	ENST00000569050	TRAV6	A0A075B6T7	132 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050		F5H768	121 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	B3GALNT1	O75752	331 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	ANXA3	P12429	323 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	ANXA7	P20073	488 aa	Known RBP	11.74	□□□□□ -0.53
PKM-223	ENST00000569050	HOXA1	P49639	335 aa	Predicted RBP	11.74	□□□□□ -0.53
PKM-223	ENST00000569050	IFITM3	Q01628	133 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	DHODH	Q02127	395 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	SELENOH	Q8IZQ5	122 aa	Known RBP	11.74	□□□□□ -0.53
PKM-223	ENST00000569050	RNF141	Q8WVD5	230 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	RBPMS	Q93062	196 aa	Known RBP	11.74	□□□□□ -0.53
PKM-223	ENST00000569050	RRNAD1	Q96FB5	475 aa	Known RBP	11.74	□□□□□ -0.53
PKM-223	ENST00000569050	SAV1	Q9H4B6	383 aa	Predicted RBP	11.74	□□□□□ -0.53
PKM-223	ENST00000569050	KCNIP3	Q9Y2W7	256 aa		11.74	□□□□□ -0.53
PKM-223	ENST00000569050	ATG12	O94817	140 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	NXPH3	O95157	252 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	SMR3B	P02814	79 aa	Predicted RBP	11.73	□□□□□ -0.53
PKM-223	ENST00000569050	RNASE2	P10153	161 aa	Known RBP	11.73	□□□□□ -0.53
PKM-223	ENST00000569050	SNCA	P37840	140 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	TMEM128	Q5BJH2	165 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	SIGLEC15	Q6ZMC9	328 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	FOXI2	Q6ZQN5	318 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	SLC35G3	Q8N808	338 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	CLUHP3	Q96NS8	147 aa		11.73	□□□□□ -0.53
PKM-223	ENST00000569050	FAM240B	A0A1B0GVZ2	78 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	CDS2	O95674	445 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	DEFB130B	P0DP73	79 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	DEFB130A	P0DP74	79 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	OPRK1	P41145	380 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	ASAH1	Q13510	395 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	CLINT1	Q14677	625 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	USF2	Q15853	346 aa	Predicted RBP	11.72	□□□□□ -0.53
PKM-223	ENST00000569050	C4orf46	Q504U0	113 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	MZT2B	Q6NZ67	158 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	OR4B1	Q8NGF8	309 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	ENKUR	Q8TC29	256 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	NUDT15	Q9NV35	164 aa		11.72	□□□□□ -0.53
PKM-223	ENST00000569050	LYRM9	A8MSI8	78 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	INS-IGF2	F8WCM5	200 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	CORT	O00230	105 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	SCGB2A1	O75556	95 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	SFT2D2	O95562	160 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	PRM2	P04554	102 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050		P0C879	139 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	KRTAP10-1	P60331	282 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	PSG9	Q00887	426 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	LGI3	Q8N145	548 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	C17orf77	Q96MU5	243 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	LINC00052	Q96N35	136 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	PGPEP1	Q9NXJ5	209 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	CACNG5	Q9UF02	275 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	TMEM56-RWDD3	S4R434	201 aa		11.71	□□□□□ -0.53
PKM-223	ENST00000569050	BUB3	O43684	328 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050	TCRB	P04435	133 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050	IGLC1	P0CG04	106 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050		Q6ZRN7	208 aa	Predicted RBP	11.7	□□□□□ -0.54
PKM-223	ENST00000569050	LYZL2	Q7Z4W2	148 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050	GPR146	Q96CH1	333 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050	PDCD10	Q9BUL8	212 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050	MAGT1	Q9H0U3	335 aa		11.7	□□□□□ -0.54
PKM-223	ENST00000569050		A0A0B4J293	547 aa		11.69	□□□□□ -0.54
PKM-223	ENST00000569050		A0A1W2PPQ1	181 aa		11.69	□□□□□ -0.54
PKM-223	ENST00000569050	C9orf170	A2RU37	121 aa		11.69	□□□□□ -0.54
PKM-223	ENST00000569050	OR4E1	P0C645	316 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms