RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, human

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT140-208	ENST00000566818	ACOT7L	Q6ZUV0	252 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	OR4D5	Q8NGN0	318 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	PSENEN	Q9NZ42	101 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	TBC1D24	Q9ULP9	559 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	HLA-DRB4	X5D2U9	266 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	AGRN	O00468	2067 aa		13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	EPPK1	P58107	5090 aa	Known RBP	13.65	□□□□□ -0.22
IFT140-208	ENST00000566818	IGHV4-28	A0A0C4DH34	117 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	SMCO3	A2RU48	225 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818		H3BMM0	161 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	GALR1	P47211	349 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	MEOX2	P50222	304 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	LINC00052	Q96N35	136 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	HRH4	Q9H3N8	390 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	CLEC5A	Q9NY25	188 aa		13.64	□□□□□ -0.23
IFT140-208	ENST00000566818	SCGB1D2	O95969	90 aa		13.63	□□□□□ -0.23
IFT140-208	ENST00000566818	IAH1	Q2TAA2	248 aa	Predicted RBP	13.63	□□□□□ -0.23
IFT140-208	ENST00000566818	FOXI2	Q6ZQN5	318 aa		13.63	□□□□□ -0.23
IFT140-208	ENST00000566818	TMEM147	Q9BVK8	224 aa		13.63	□□□□□ -0.23
IFT140-208	ENST00000566818	C20orf85	Q9H1P6	137 aa		13.63	□□□□□ -0.23
IFT140-208	ENST00000566818	ISLR	O14498	428 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	SPATA31B1P	Q5VZV4	182 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	TMEM144	Q7Z5S9	345 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	MITD1	Q8WV92	249 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	SMIM8	Q96KF7	97 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	GPR82	Q96P67	336 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	WDR12	Q9GZL7	423 aa	Known RBP	13.62	□□□□□ -0.23
IFT140-208	ENST00000566818		X6R8D5	127 aa		13.62	□□□□□ -0.23
IFT140-208	ENST00000566818	BIRC6	Q9NR09	4857 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	C11orf94	C9JXX5	98 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	SOCS3	O14543	225 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	LYRM1	O43325	122 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	ORM2	P19652	201 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	CSNK1G2-AS1	Q8NCQ2	148 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	OR1B1	Q8NGR6	318 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	C2CD4C	Q8TF44	421 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	SAV1	Q9H4B6	383 aa	Predicted RBP	13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	SLC25A22	Q9H936	323 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	XCL2	Q9UBD3	114 aa		13.61	□□□□□ -0.23
IFT140-208	ENST00000566818	ZNF98	A6NK75	572 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	RBMY1A1	P0DJD3	496 aa	Known RBP	13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	RBMY1C	P0DJD4	496 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	DLK1	P80370	383 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	RBMY1F	Q15415	496 aa	Known RBP	13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	EBLN2	Q6P2I7	272 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	CYP2G1P	Q6ZSU1	146 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	SLC25A32	Q9H2D1	315 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	MGAT4C	Q9UBM8	478 aa		13.6	□□□□□ -0.23
IFT140-208	ENST00000566818	TSC22D2	O75157	780 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	IL5	P05113	134 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	GATA2	P23769	480 aa	Predicted RBP	13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	TCTA	P57738	103 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	TAS2R30	P59541	319 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	SELENOT	P62341	195 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	ZNF846	Q147U1	533 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	S100A7A	Q86SG5	101 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	C16orf92	Q96LL3	132 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	CLUHP3	Q96NS8	147 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	RPRM	Q9NS64	109 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	GSKIP	Q9P0R6	139 aa		13.59	□□□□□ -0.23
IFT140-208	ENST00000566818	FNDC10	F2Z333	226 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	IGKV3-20	P01619	116 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	METTL15P1	P0C7V9	234 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	RAP2B	P61225	183 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	GDF5OS	Q5U4N7	250 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	TMEM14EP	Q6UXP3	125 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	OR10P1	Q8NGE3	313 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	CCDC32	Q9BV29	185 aa		13.58	□□□□□ -0.24
IFT140-208	ENST00000566818	PLA2G10	O15496	165 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	TCRB	P04435	133 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	HLA-DMB	P28068	263 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	PAX9	P55771	341 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	RRAS2	P62070	204 aa	Predicted RBP	13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	LGALS9C	Q6DKI2	356 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	OR4B1	Q8NGF8	309 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	RSG1	Q9BU20	258 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	HIGD1A	Q9Y241	93 aa		13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	RCL1	Q9Y2P8	373 aa	Known RBP	13.57	□□□□□ -0.24
IFT140-208	ENST00000566818	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	TRAV10	A0A0B4J240	114 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	PMS2P5	A8MQ11	134 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818		H3BRN7	92 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	HYPM	O75409	117 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	LINC00869	P0C866	280 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	DEFB1	P60022	68 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	NPVF	Q9HCQ7	196 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	NUDT15	Q9NV35	164 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	DOK5	Q9P104	306 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818	RNF24	Q9Y225	148 aa		13.56	□□□□□ -0.24
IFT140-208	ENST00000566818		A0A0J9YX75	114 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818		L7N2F9	121 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	CCNK	O75909	580 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	VAMP2	P63027	116 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	PSG9	Q00887	426 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	TEPP	Q6URK8	271 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.55	□□□□□ -0.24
IFT140-208	ENST00000566818	NEU1	Q99519	415 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms