RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF835Q9Y2P0 537 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 LAMTOR2Q9Y2Q5 125 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 TAF1LQ8IZX4 1826 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 CCDC141Q6ZP82 1450 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 PLXNA3P51805 1871 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 UBR3Q6ZT12 1888 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 HELZ2Q9BYK8 2649 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 HECTD1Q9ULT8 2610 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 DNAH14Q0VDD8 3507 aa2.11□□□□□ -2.07
HERPUD1-211ENST00000566550 OTOFQ9HC10 1997 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 FER1L6Q2WGJ9 1857 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 SCN7AQ01118 1682 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 LOC102725191A0A1B0GVB3 256 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 ODAMA1E959 279 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 TMEM189A5PLL7 270 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF860A6NHJ4 632 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF98A6NK75 572 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 FABP5P3A8MUU1 101 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 H3BQ85 93 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 BUB1B-PAK6H3BSN5 160 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 OR2T1O43869 369 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 GADD45GO95257 159 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 FAM107AO95990 144 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 CISD3P0C7P0 127 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 SRP14P37108 136 aaKnown RBP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 POLR2HP52434 150 aaKnown RBP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 CDC42P60953 191 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 RPS11P62280 158 aaKnown RBP eCLIP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 EIF5AP63241 154 aaKnown RBP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 RTL8BQ17RB0 113 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 RRN3P1Q2M238 152 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 FAM229BQ4G0N7 80 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 DNLZQ5SXM8 178 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF660Q6AZW8 331 aaPredicted RBP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 ZNF880Q6PDB4 577 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 TMEM229BQ8NBD8 167 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 BPIFB6Q8NFQ5 453 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 TSTD1Q8NFU3 115 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 OR8D4Q8NGM9 314 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 PPTC7Q8NI37 304 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 DCANP1Q8TF63 244 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 FGF13Q92913 245 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 GPX7Q96SL4 187 aaPredicted RBP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 TM2D3Q9BRN9 247 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 GINS4Q9BRT9 223 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 RTL8AQ9BWD3 113 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 AICDAQ9GZX7 198 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 TMEM126AQ9H061 195 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 NUBP2Q9Y5Y2 271 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 C4BP0C0L5 1744 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 RGPD8O14715 1765 aaPredicted RBP2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 BCORQ6W2J9 1755 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 RGPD5Q99666 1765 aa2.1□□□□□ -2.07
HERPUD1-211ENST00000566550 CNOT1A5YKK6 2376 aaKnown RBP2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 NAIPQ13075 1403 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 COL4A6Q14031 1691 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 ABCA2Q9BZC7 2435 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 IFT172Q9UG01 1749 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 ZFYVE26Q68DK2 2539 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 IGKV1D-37A0A075B6S9 117 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 TRAV36DV7A0A075B6V5 113 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 TRAV38-1A0A0B4J264 116 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 GRIFINA4D1Z8 144 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 C17orf51A8MQB3 221 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 H3BT86 120 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 K7EM74 188 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 LYZL6O75951 148 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 NDUFB2O95178 105 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 IGHV3-53P01767 116 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 DBIP07108 87 aaKnown RBP2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 BCL2P10415 239 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 MDKP21741 143 aaPredicted RBP2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 INSL3P51460 131 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 RBM11P57052 281 aaKnown RBP2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 KISS1Q15726 138 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 MSMO1Q15800 293 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 BCL2L15Q5TBC7 163 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 SDIM1Q6ZPB5 146 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 Q6ZQT7 251 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 TRAPPC6BQ86SZ2 158 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 NUP35Q8NFH5 326 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 ISOC1Q96CN7 298 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 IMMP2LQ96T52 175 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 MIEN1Q9BRT3 115 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 OR2H1Q9GZK4 316 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 OR8D2Q9GZM6 311 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 C16orf95Q9H693 158 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 TUBA4BQ9H853 241 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 POPDC3Q9HBV1 291 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 OSTCQ9NRP0 149 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 ASF1BQ9NVP2 202 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 SPANXCQ9NY87 97 aa2.09□□□□□ -2.07
HERPUD1-211ENST00000566550 KLK5Q9Y337 293 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms