RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CA5AP35218 305 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 CAPZBP47756 277 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 RELAQ04206 551 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 FOXF1Q12946 379 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 NEDD8Q15843 81 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 RPL13AP3Q6NVV1 102 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 SLC48A1Q6P1K1 146 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 CLVS1Q8IUQ0 354 aaPredicted RBP2.41□□□□□ -2.02
CNOT1-209ENST00000566240 SGMS2Q8NHU3 365 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 S100ZQ8WXG8 99 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 DGCR14Q96DF8 476 aaKnown RBP2.41□□□□□ -2.02
CNOT1-209ENST00000566240 PECRQ9BY49 303 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 TAAR3PQ9P1P4 343 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 AK3Q9UIJ7 227 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 MDC1Q14676 2089 aaKnown RBP2.41□□□□□ -2.02
CNOT1-209ENST00000566240 ATG2BQ96BY7 2078 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 HEATR5BQ9P2D3 2071 aa2.41□□□□□ -2.02
CNOT1-209ENST00000566240 MDFIC2A0A1B0GVS7 189 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 A0A1B0GW54 56 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 EFCAB10A6NFE3 127 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 TMEM210A6NLX4 147 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 CLDN24A6NM45 220 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 INMT-MINDY4F8WBC2 141 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 C3orf84H3BNL1 204 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 SLC22A1O15245 554 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 PLXNB1O43157 2135 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 CHP2O43745 196 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 IFNGP01579 166 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 HMGN2P05204 90 aaKnown RBP2.4□□□□□ -2.03
CNOT1-209ENST00000566240 DBIP07108 87 aaKnown RBP2.4□□□□□ -2.03
CNOT1-209ENST00000566240 ALOX5APP20292 161 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 BLVRBP30043 206 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-209ENST00000566240 S100A5P33763 92 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 XCL1P47992 114 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 GABRA4P48169 554 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 IDH3GP51553 393 aaPredicted RBP2.4□□□□□ -2.03
CNOT1-209ENST00000566240 TMBIM6P55061 237 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 COPZ1P61923 177 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 RANP62826 216 aaKnown RBP2.4□□□□□ -2.03
CNOT1-209ENST00000566240 CLDN22Q8N7P3 220 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 OR1L8Q8NGR8 309 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 OR13C8Q8NGS7 320 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 CEP19Q96LK0 163 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 BCL2L10Q9HD36 194 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 PRTFDC1Q9NRG1 225 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 TAS2R7Q9NYW3 318 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 PSORS1C2Q9UIG4 136 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 SLC22A13Q9Y226 551 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 PRELID1Q9Y255 219 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 ERGIC3Q9Y282 383 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 CCDC88CQ9P219 2028 aa2.4□□□□□ -2.03
CNOT1-209ENST00000566240 PNMA8CA0A1B0GUJ8 204 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 TRAPPC13A5PLN9 417 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF860A6NHJ4 632 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 CPSF4LA6NMK7 179 aaKnown RBP2.39□□□□□ -2.03
CNOT1-209ENST00000566240 RIIAD1A6NNX1 92 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 A8MUN3 132 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 H0YGG7 62 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 HMGN4O00479 90 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 OR2B3O76000 313 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 OR5F1O95221 314 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 NSA2O95478 260 aaKnown RBP2.39□□□□□ -2.03
CNOT1-209ENST00000566240 NPYP01303 97 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 STATHP02808 62 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 HMGN1P05114 100 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 CTXN2P0C2S0 81 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 CD79AP11912 226 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 TAS2R20P59543 309 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 DEFA1P59665 94 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 DEFA3P59666 94 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 AP3S2P59780 193 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 KRR1Q13601 381 aaKnown RBP2.39□□□□□ -2.03
CNOT1-209ENST00000566240 DEFB110Q30KQ9 67 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 ARHGAP11BQ3KRB8 267 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 DHRS4L2Q6PKH6 230 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 Q6ZS52 159 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 OR5D16Q8NGK9 328 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 OR2T4Q8NH00 348 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF675Q8TD23 568 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 GNPDA2Q8TDQ7 276 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 SMCR5Q8TEV8 140 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 AP3S1Q92572 193 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 BORCS5Q969J3 196 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 ISOC1Q96CN7 298 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 ZHX1-C8orf76Q96EF9 292 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 TTTY13Q9BZ97 58 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 NMNAT1Q9HAN9 279 aaPredicted RBP2.39□□□□□ -2.03
CNOT1-209ENST00000566240 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.39□□□□□ -2.03
CNOT1-209ENST00000566240 BAIAP2Q9UQB8 552 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 SLC35A3Q9Y2D2 325 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 MED31Q9Y3C7 131 aa2.39□□□□□ -2.03
CNOT1-209ENST00000566240 SNRNP200O75643 2136 aaKnown RBP2.39□□□□□ -2.03
CNOT1-209ENST00000566240 A0A1B0GX78 115 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 PLA2G10O15496 165 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 GNRH2O43555 120 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 TFPTP0C1Z6 253 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms