RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
HERC2-207ENST00000564734 NUTF2P61970 127 aaKnown RBP12.13□□□□□ -0.47
HERC2-207ENST00000564734 UBE2G1P62253 170 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
HERC2-207ENST00000564734 NIT1Q86X76 327 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 C18orf32Q8TCD1 76 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 NEU1Q99519 415 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 RNF5Q99942 180 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 PRSS22Q9GZN4 317 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 FBXL15Q9H469 300 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 A0A1B0GXF2 115 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 LTAP01374 205 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 PRB1P04280 392 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 IGLC1P0CG04 106 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 TMEM68Q96MH6 324 aa12.13□□□□□ -0.47
HERC2-207ENST00000564734 MRPL27Q9P0M9 148 aaKnown RBP12.13□□□□□ -0.47
HERC2-207ENST00000564734 LDLRAD2Q5SZI1 272 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 PRR27Q6MZM9 219 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 MUC15Q8N387 334 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 C5orf17Q8NAS9 161 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 OR2J3O76001 311 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 AMTP48728 403 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 KLF5Q13887 457 aaPredicted RBP12.12□□□□□ -0.47
HERC2-207ENST00000564734 LEMD1Q68G75 181 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
HERC2-207ENST00000564734 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
HERC2-207ENST00000564734 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 HIGD1CA8MV81 97 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 M0R143 59 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 COX7A1P24310 79 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 FBXL19-AS1Q494R0 122 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 FMC1Q96HJ9 113 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 Q9H3A6 140 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 TCRAP04437 139 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 PSG1P11464 419 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 ATP5L2Q7Z4Y8 100 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 RPEQ96AT9 228 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 TMEM14CQ9P0S9 112 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 HIGD1AQ9Y241 93 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 CA7P43166 264 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 KRTDAPP60985 99 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
HERC2-207ENST00000564734 SRSF8Q9BRL6 282 aaKnown RBP12.11□□□□□ -0.47
HERC2-207ENST00000564734 ZNF492Q9P255 531 aa12.11□□□□□ -0.47
HERC2-207ENST00000564734 PMCHP20382 165 aa12.1□□□□□ -0.47
HERC2-207ENST00000564734 GRNP28799 593 aaKnown RBP12.1□□□□□ -0.47
HERC2-207ENST00000564734 ZNF672Q499Z4 452 aaPredicted RBP12.1□□□□□ -0.47
HERC2-207ENST00000564734 VAMP8Q9BV40 100 aa12.1□□□□□ -0.47
HERC2-207ENST00000564734 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
HERC2-207ENST00000564734 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
HERC2-207ENST00000564734 ALKBH7Q9BT30 221 aaPredicted RBP12.1□□□□□ -0.47
HERC2-207ENST00000564734 RPP21Q9H633 154 aaKnown RBP12.1□□□□□ -0.47
HERC2-207ENST00000564734 PAM16Q9Y3D7 125 aa12.1□□□□□ -0.47
HERC2-207ENST00000564734 H3BTX0 84 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 CTRLP40313 264 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 CT83Q5H943 113 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 SLC25A39Q9BZJ4 359 aaPredicted RBP12.09□□□□□ -0.47
HERC2-207ENST00000564734 WNT10AQ9GZT5 417 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 RPH3ALQ9UNE2 315 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 ADGRG4Q8IZF6 3080 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 IGKV1-17P01599 117 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
HERC2-207ENST00000564734 MMDQ15546 238 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 ZNF705AQ6ZN79 300 aaPredicted RBP12.09□□□□□ -0.47
HERC2-207ENST00000564734 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 OTORQ9NRC9 128 aa12.09□□□□□ -0.47
HERC2-207ENST00000564734 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 GTSF1Q8WW33 167 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 PKDREJQ9NTG1 2253 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 K7EIM0 57 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 TIMM23O14925 209 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 IGLV2-11P01706 119 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 LYZP61626 148 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 TCF24Q7RTU0 167 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 OR4B1Q8NGF8 309 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
HERC2-207ENST00000564734 A6NNC1 897 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 GPR6P46095 362 aaPredicted RBP12.07□□□□□ -0.48
HERC2-207ENST00000564734 SSBP4Q9BWG4 385 aaPredicted RBP12.07□□□□□ -0.48
HERC2-207ENST00000564734 LRRK2Q5S007 2527 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 NPIPB6E9PJ23 425 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 LIPFP07098 398 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 CFHR4Q92496 578 aa12.07□□□□□ -0.48
HERC2-207ENST00000564734 RBM14Q96PK6 669 aaKnown RBP12.07□□□□□ -0.48
HERC2-207ENST00000564734 C21orf62-AS1Q17RA5 79 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 C16orf54Q6UWD8 224 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 GFRA4Q9GZZ7 299 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 ONECUT1Q9UBC0 465 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 TRBV6-1A0A0K0K1D8 114 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 A8MWL6 223 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 G0S2P27469 103 aa12.06□□□□□ -0.48
HERC2-207ENST00000564734 Q86TA4 180 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms