RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 BAGE3Q86Y29 109 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 BAGE2Q86Y30 109 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 OR52E5Q8NH55 327 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 SFRP2Q96HF1 295 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 RITA1Q96K30 269 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 HILPDAQ9Y5L2 63 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 GRIFINA4D1Z8 144 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 UPK2O00526 184 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 TSPAN13O95857 204 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 MEF2BQ02080 365 aaPredicted RBP14.17□□□□□ -0.14
GDE1-203ENST00000564172 RAB31Q13636 194 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 SPINK9Q5DT21 86 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 TMEM14BQ9NUH8 114 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 GAGE10A6NGK3 116 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 OR11H12B2RN74 326 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 IGLV2-23P01705 113 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 UBE2E1P51965 193 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 PDLIM3Q53GG5 364 aaPredicted RBP14.16□□□□□ -0.14
GDE1-203ENST00000564172 BVES-AS1Q5T3Y7 98 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 OR11H1Q8NG94 326 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 OR5C1Q8NGR4 320 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 OR11H2Q8NH07 326 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 FOXA2Q9Y261 457 aaPredicted RBP14.16□□□□□ -0.14
GDE1-203ENST00000564172 RNF114Q9Y508 228 aa14.16□□□□□ -0.14
GDE1-203ENST00000564172 A0A096LNT2 108 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 CST7O76096 145 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 LGALS4P56470 323 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 ODF1Q14990 250 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 MINOS1Q5TGZ0 78 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 MINOS1-NBL1R4GNA1 71 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 SVEP1Q4LDE5 3571 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 TIMM23O14925 209 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 MSMBP08118 114 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 SPANXN5Q5MJ07 72 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 OR10P1Q8NGE3 313 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 PRNDQ9UKY0 176 aa14.15□□□□□ -0.14
GDE1-203ENST00000564172 TNCP24821 2201 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 HSPE1P61604 102 aaKnown RBP14.14□□□□□ -0.15
GDE1-203ENST00000564172 RHOBP62745 196 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 TCF19Q9Y242 345 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 B4DSR2 109 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 VSTM2AQ8TAG5 236 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 CFHR4Q92496 578 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 MBD6Q96DN6 1003 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 MRAP2Q96G30 205 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 RPRMQ9NS64 109 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 APCP25054 2843 aa14.14□□□□□ -0.15
GDE1-203ENST00000564172 MAP1AP78559 2803 aaPredicted RBP14.14□□□□□ -0.15
GDE1-203ENST00000564172 C3orf79P0CE67 100 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 MYOD1P15172 320 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 DYNLT3P51808 116 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 MPV17L2Q567V2 206 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 OR10J3Q5JRS4 329 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 DYNAPQ8N1N2 210 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 TMEM167AQ8TBQ9 72 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 PSMG3Q9BT73 122 aaPredicted RBP14.13□□□□□ -0.15
GDE1-203ENST00000564172 TRAV8-6A0A0B4J262 113 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 CENPVL3A0A0U1RRI6 287 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 OOSP1A8MZH6 123 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 RUNX1Q01196 453 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 SMAGPQ0VAQ4 97 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 VMA21Q3ZAQ7 101 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 MRPL54Q6P161 138 aaKnown RBP14.13□□□□□ -0.15
GDE1-203ENST00000564172 TMEM14EPQ6UXP3 125 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 OR8I2Q8N0Y5 310 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 FAM110AQ9BQ89 295 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 ZNF257Q9Y2Q1 563 aa14.13□□□□□ -0.15
GDE1-203ENST00000564172 VDAC2P45880 294 aaPredicted RBP14.12□□□□□ -0.15
GDE1-203ENST00000564172 OR4A5Q8NH83 315 aa14.12□□□□□ -0.15
GDE1-203ENST00000564172 C1orf159Q96HA4 380 aa14.12□□□□□ -0.15
GDE1-203ENST00000564172 TET2Q6N021 2002 aaPredicted RBP14.11□□□□□ -0.15
GDE1-203ENST00000564172 TRBV9A0A0B4J1U6 114 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 CNTFRP26992 372 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 RPL8P62917 257 aaKnown RBP14.11□□□□□ -0.15
GDE1-203ENST00000564172 SERF2P84101 59 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 CCDC144NLQ6NUI1 221 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 OR4C12Q96R67 309 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 RNF5Q99942 180 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 TEX50A0A1B0GTY4 177 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 LINC00869P0C866 280 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 SAA4P35542 130 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 HSD52Q0P140 79 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 ARL16Q0P5N6 197 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 ZNF726P1Q15940 193 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 LCN15Q6UWW0 184 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 ERASQ7Z444 233 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 HAPLN4Q86UW8 402 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 DPF1Q92782 380 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 AJUBAQ96IF1 538 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 KCNS1Q96KK3 526 aa14.11□□□□□ -0.15
GDE1-203ENST00000564172 HEYLQ9NQ87 328 aaPredicted RBP14.11□□□□□ -0.15
GDE1-203ENST00000564172 TMEM189A5PLL7 270 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 IFNA5P01569 189 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 AMTP48728 403 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 PSMB3P49720 205 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 LOXL1Q08397 574 aaPredicted RBP14.1□□□□□ -0.15
GDE1-203ENST00000564172 PSG5Q15238 335 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 CD300EQ496F6 205 aaPredicted RBP14.1□□□□□ -0.15
GDE1-203ENST00000564172 TEX45Q8NA69 505 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms