RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OR7C2O60412 319 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 NDUFS6O75380 124 aaKnown RBP14.04□□□□□ -0.16
COMMD4-208ENST00000563220 FABP1P07148 127 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 TAGLN2P37802 199 aaKnown RBP14.04□□□□□ -0.16
COMMD4-208ENST00000563220 KIAA0141Q14154 515 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-208ENST00000563220 TMEM95Q3KNT9 176 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 PQLC2Q6ZP29 291 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 TEX29Q8N6K0 151 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 ZNF491Q8N8L2 437 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 OR5AU1Q8NGC0 362 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 MRPL27Q9P0M9 148 aaKnown RBP14.04□□□□□ -0.16
COMMD4-208ENST00000563220 ACANP16112 2415 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 CLEC3BP05452 202 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 OR10J4P0C629 311 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 ADMP35318 185 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 ATP5G3P48201 142 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 FAM90A2PQ658T7 463 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 CCDC140Q96MF4 163 aa14.04□□□□□ -0.16
COMMD4-208ENST00000563220 YTHDF2Q9Y5A9 579 aaKnown RBP14.04□□□□□ -0.16
COMMD4-208ENST00000563220 WI2-2373I1.2A0A1W2PRP0 233 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 C11orf94C9JXX5 98 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 TRGV3P03979 118 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 SRP14P37108 136 aaKnown RBP14.03□□□□□ -0.16
COMMD4-208ENST00000563220 SNRPEP62304 92 aaKnown RBP14.03□□□□□ -0.16
COMMD4-208ENST00000563220 PNRC1Q12796 327 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-208ENST00000563220 CST9LP1Q5W188 147 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 OR4F5Q8NH21 305 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 DUX5Q96PT3 197 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 OR4F4Q96R69 305 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 HIGD1AQ9Y241 93 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 NOTCH2Q04721 2471 aa14.03□□□□□ -0.16
COMMD4-208ENST00000563220 IL4P05112 153 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 S100A6P06703 90 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 PYYP10082 97 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 GPR183P32249 361 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 CFHR3Q02985 330 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 ATP5G2Q06055 141 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 EEF1AKMT3Q96AZ1 226 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 ZNF414Q96IQ9 312 aa14.02□□□□□ -0.16
COMMD4-208ENST00000563220 SONP18583 2426 aaKnown RBP14.02□□□□□ -0.17
COMMD4-208ENST00000563220 BRI3O95415 125 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 S100A8P05109 93 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 MEOX2P50222 304 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 LEMD1Q68G75 181 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 CLEC19AQ6UXS0 136 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 Q8WTZ3 238 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 RNF125Q96EQ8 232 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 C12orf57Q99622 126 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 KLK15Q9H2R5 256 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 TMEM167BQ9NRX6 74 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 IGLV1-40P01703 118 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 NPPCP23582 126 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 PAXXQ9BUH6 204 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 SLC25A39Q9BZJ4 359 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-208ENST00000563220 OR51M1Q9H341 326 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 TMEM242Q9NWH2 141 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 ZNF580Q9UK33 172 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 MYO9AB2RTY4 2548 aa14.01□□□□□ -0.17
COMMD4-208ENST00000563220 TRBV7-1A0A0A6YYK4 115 aa14□□□□□ -0.17
COMMD4-208ENST00000563220 FAM223BA6NKX1 122 aa14□□□□□ -0.17
COMMD4-208ENST00000563220 H3BUA1 57 aa14□□□□□ -0.17
COMMD4-208ENST00000563220 TPPP2P59282 170 aa14□□□□□ -0.17
COMMD4-208ENST00000563220 USF2Q15853 346 aaPredicted RBP14□□□□□ -0.17
COMMD4-208ENST00000563220 FAM223AQ8IWN6 122 aa14□□□□□ -0.17
COMMD4-208ENST00000563220 ANK3Q12955 4377 aaKnown RBP14□□□□□ -0.17
COMMD4-208ENST00000563220 IGHV3-35A0A0C4DH35 117 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 TMEM250H0YL14 139 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 SMR3AQ99954 134 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 ZNF702PQ9H963 129 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 SNRPCP09234 159 aaKnown RBP13.99□□□□□ -0.17
COMMD4-208ENST00000563220 UBE2L3P68036 154 aaKnown RBP13.99□□□□□ -0.17
COMMD4-208ENST00000563220 LCNL1Q6ZST4 164 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 ZNF329Q86UD4 541 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 FXYD5Q96DB9 178 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 PRSS22Q9GZN4 317 aa13.99□□□□□ -0.17
COMMD4-208ENST00000563220 SCGB2A1O75556 95 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 SMIM6P0DI80 62 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 PF4V1P10720 104 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 S100A12P80511 92 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 ELOBQ15370 118 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 NPFFR1Q9GZQ6 430 aa13.98□□□□□ -0.17
COMMD4-208ENST00000563220 GAR1Q9NY12 217 aaKnown RBP13.98□□□□□ -0.17
COMMD4-208ENST00000563220 H3BRN7 92 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 TGOLN2O43493 480 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 STXBP6Q8NFX7 210 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 RPUSD4Q96CM3 377 aaKnown RBP13.97□□□□□ -0.17
COMMD4-208ENST00000563220 SHANK2-AS3Q9BTD1 123 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 ARL2-SNX15V9GYD0 113 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 ZNF727A8MUV8 499 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 PDE6DO43924 150 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 GP9P14770 177 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 RAB9AP51151 201 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 C10orf99Q6UWK7 81 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 TMEM86BQ8N661 226 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 USMG5Q96IX5 58 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 SDF2L1Q9HCN8 221 aa13.97□□□□□ -0.17
COMMD4-208ENST00000563220 ZNF674Q2M3X9 581 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms