RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 C22orf39Q6P5X5 142 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 KRTAP26-1Q6PEX3 210 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 HAGHLQ6PII5 290 aaPredicted RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 GNPDA2Q8TDQ7 276 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 ZNF431Q8TF32 576 aaPredicted RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 CANT1Q8WVQ1 401 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 BTF3L4Q96K17 158 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 LYSMD1Q96S90 227 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 TMEM126AQ9H061 195 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 LY96Q9Y6Y9 160 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 TAF1LQ8IZX4 1826 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 RIMBP3CA6NJZ7 1639 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 RIMBP3BA6NNM3 1639 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 PHRF1Q9P1Y6 1649 aaKnown RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 RIMBP3Q9UFD9 1639 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 ZFYVE9O95405 1425 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 MED12Q93074 2177 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 DENND4CQ5VZ89 1909 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 ARHGEF28Q8N1W1 1705 aaKnown RBP0.18□□□□□ -2.38
CHD9-207ENST00000562806 TRBV19A0A075B6N1 114 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 TRAV10A0A0B4J240 114 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 E7EUB6 86 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 F8W1H4 67 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 NDUFB3O43676 98 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 OR7C1O76099 320 aaPredicted RBP0.18□□□□□ -2.38
CHD9-207ENST00000562806 ERP29P30040 261 aaKnown RBP0.18□□□□□ -2.38
CHD9-207ENST00000562806 DSCR4P56555 118 aaPredicted RBP0.18□□□□□ -2.38
CHD9-207ENST00000562806 PIGPP57054 158 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 DEFA3P59666 94 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 ROMO1P60602 79 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 CCL7P80098 99 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 MYL5Q02045 173 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 SPA17Q15506 151 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 RRN3P1Q2M238 152 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 ZNF833PQ6ZTB9 187 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 GRINAQ7Z429 371 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 TEN1Q86WV5 123 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 PDZD9Q8IXQ8 264 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 OTUD6BQ8N6M0 293 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 OR11H6Q8NGC7 330 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 OR5D14Q8NGL3 314 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 OR10K1Q8NGX5 313 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 STAG3L4Q8TBR4 150 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 PSMF1Q92530 271 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 PPP1R14BQ96C90 147 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 SLC25A21Q9BQT8 299 aaPredicted RBP0.18□□□□□ -2.38
CHD9-207ENST00000562806 KIFC1Q9BW19 673 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 UCK1Q9HA47 277 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 NMNAT1Q9HAN9 279 aaPredicted RBP0.18□□□□□ -2.38
CHD9-207ENST00000562806 PCTPQ9UKL6 214 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 CCDC144AA2RUR9 1427 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 PLXND1Q9Y4D7 1925 aa0.18□□□□□ -2.38
CHD9-207ENST00000562806 TRAV4A0A0B4J268 109 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 H3BRM9 83 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 ERC2-IT1O76042 136 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 COX7CP15954 63 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 HOXA6P31267 233 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 CDKN2CP42773 168 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 MYL6P60660 151 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 EXOC3-AS1Q8N2X6 119 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 OR10AC1Q8NH08 325 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 SIGMAR1Q99720 223 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 IMUPQ9GZP8 106 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 PSTPIP2Q9H939 334 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 TMEM138Q9NPI0 162 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 SLC22A13Q9Y226 551 aa0.17□□□□□ -2.38
CHD9-207ENST00000562806 SNRNP200O75643 2136 aaKnown RBP0.16□□□□□ -2.38
CHD9-207ENST00000562806 TMEM114B3SHH9 223 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 C17orf112F2Z3M2 114 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 TAX1BP3O14907 124 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 GGCTO75223 188 aaKnown RBP0.16□□□□□ -2.38
CHD9-207ENST00000562806 IFNA7P01567 189 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 CD2P06729 351 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 CXCL8P10145 99 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 UBE2BP63146 152 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
CHD9-207ENST00000562806 LIN52Q52LA3 116 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 TEX37Q96LM6 180 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 PRAP1Q96NZ9 151 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 PBOV1Q9GZY1 135 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 MED29Q9NX70 200 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 ARHGEF11O15085 1522 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 APCP25054 2843 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 PLXNA4Q9HCM2 1894 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 CECR2Q9BXF3 1484 aa0.16□□□□□ -2.38
CHD9-207ENST00000562806 PCF11O94913 1555 aaKnown RBP0.15□□□□□ -2.38
CHD9-207ENST00000562806 USP24Q9UPU5 2620 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 A0A087WSZ3 146 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 A0A0D9SG42 100 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 B4DSR2 109 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 K7EIL1 84 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 M0R378 163 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 OR10J4P0C629 311 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 ATP5G3P48201 142 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 SERPINB9P50453 376 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 CDK6Q00534 326 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 AKIRIN2Q53H80 203 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 EIF5AL1Q6IS14 154 aaKnown RBP0.15□□□□□ -2.39
CHD9-207ENST00000562806 Q6ZS92 163 aa0.15□□□□□ -2.39
CHD9-207ENST00000562806 OR5AS1Q8N127 324 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms