RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 AMMECR1Q9Y4X0 333 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-206ENST00000561781 BRI3O95415 125 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 ARL3P36405 182 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 LINC00479Q96M42 142 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 UFC1Q9Y3C8 167 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 NMUP48645 174 aa15.08■□□□□ 0.01
RAB40C-206ENST00000561781 CT83Q5H943 113 aa15.08■□□□□ 0.01
RAB40C-206ENST00000561781 SMIM20Q8N5G0 67 aa15.08■□□□□ 0.01
RAB40C-206ENST00000561781 PRRG4Q9BZD6 226 aa15.08■□□□□ 0.01
RAB40C-206ENST00000561781 PRO0461Q9UI25 63 aa15.08■□□□□ 0.01
RAB40C-206ENST00000561781 A0A096LPE4 126 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 A0A1W2PPZ6 126 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 IGLL5B9A064 214 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 CELA2AP08217 269 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 CT45A10P0DMU9 189 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 PCP2Q8IVA1 136 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 DDB2Q92466 427 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 PROK2Q9HC23 129 aa15.08■□□□□ 0
RAB40C-206ENST00000561781 F11RQ9Y624 299 aaKnown RBP15.08■□□□□ 0
RAB40C-206ENST00000561781 K7ERJ3 54 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 APOHP02749 345 aaPredicted RBP15.07■□□□□ 0
RAB40C-206ENST00000561781 CSN3P07498 182 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 FOLR3P41439 243 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 PSMG4Q5JS54 123 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 HINT2Q9BX68 163 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 TM2D2Q9BX73 214 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 RPP21Q9H633 154 aaKnown RBP15.07■□□□□ 0
RAB40C-206ENST00000561781 C7orf69Q9H7B7 122 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.07■□□□□ 0
RAB40C-206ENST00000561781 A0A1B0GWB2 263 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 C12orf77C9JDV5 145 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 FNDC10F2Z333 226 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 PLPPR2Q96GM1 343 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 HARBI1Q96MB7 349 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 C1QTNF4Q9BXJ3 329 aa15.07■□□□□ 0
RAB40C-206ENST00000561781 OR8A1Q8NGG7 326 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 OR10X1Q8NGY0 326 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 PKIBQ9C010 78 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 GFRA4Q9GZZ7 299 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 MED13Q9UHV7 2174 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 TCRBV4S1A1TA0A5B7 111 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 PEX7O00628 323 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 CXCL13O43927 109 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 XGP55808 180 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 ODF1Q14990 250 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 RBPMS2Q6ZRY4 209 aaKnown RBP15.06■□□□□ 0
RAB40C-206ENST00000561781 Q6ZS92 163 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 RPRMLQ8N4K4 120 aa15.06■□□□□ 0
RAB40C-206ENST00000561781 NHP2Q9NX24 153 aaKnown RBP15.06■□□□□ 0
RAB40C-206ENST00000561781 C8orf88P0DMB2 117 aa15.05■□□□□ 0
RAB40C-206ENST00000561781 ZNF137PP52743 207 aa15.05■□□□□ 0
RAB40C-206ENST00000561781 ZNF146Q15072 292 aa15.05■□□□□ 0
RAB40C-206ENST00000561781 PGLYRP4Q96LB8 373 aa15.05■□□□□ 0
RAB40C-206ENST00000561781 J3QT63 122 aa15.05■□□□□ -0
RAB40C-206ENST00000561781 SS18L1O75177 396 aaPredicted RBP15.05■□□□□ -0
RAB40C-206ENST00000561781 ZNF503-AS2A6NEH8 195 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 DNPH1O43598 174 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 DUTP33316 252 aaKnown RBP15.04■□□□□ -0
RAB40C-206ENST00000561781 ZFAND6Q6FIF0 208 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 VKORC1L1Q8N0U8 176 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 ATRXP46100 2492 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 TET2Q6N021 2002 aaPredicted RBP15.04■□□□□ -0
RAB40C-206ENST00000561781 KALRNO60229 2985 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 TRGV8A0A0C4DH27 118 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 YRDCQ86U90 279 aaKnown RBP15.04■□□□□ -0
RAB40C-206ENST00000561781 GGNQ86UU5 652 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 PRSS3P2Q8NHM4 247 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 OSR1Q8TAX0 266 aaPredicted RBP15.04■□□□□ -0
RAB40C-206ENST00000561781 CHAC1Q9BUX1 264 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 VCX2Q9H322 139 aa15.04■□□□□ -0
RAB40C-206ENST00000561781 ZFYVE26Q68DK2 2539 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 HCFC1P51610 2035 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 NPIPB6E9PJ23 425 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 TCTAP57738 103 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 CACNG7P62955 275 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 C8orf46Q8TAG6 207 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 PIFOQ8TCI5 191 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 UBE2L3P68036 154 aaKnown RBP15.03■□□□□ -0
RAB40C-206ENST00000561781 SLC25A33Q9BSK2 321 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 PRSS22Q9GZN4 317 aa15.03■□□□□ -0
RAB40C-206ENST00000561781 TRAV3A0A0B4J244 114 aa15.02■□□□□ -0
RAB40C-206ENST00000561781 PSPNO60542 156 aa15.02■□□□□ -0
RAB40C-206ENST00000561781 FCGR3BO75015 233 aa15.02■□□□□ -0
RAB40C-206ENST00000561781 THBDP07204 575 aa15.02■□□□□ -0
RAB40C-206ENST00000561781 Q6AWC8 147 aa15.02■□□□□ -0
RAB40C-206ENST00000561781 CEND1Q8N111 149 aa15.02■□□□□ -0
RAB40C-206ENST00000561781 MRPL32Q9BYC8 188 aaKnown RBP15.02■□□□□ -0
RAB40C-206ENST00000561781 IGHV3-43A0A0B4J1X8 118 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 IGHV3-43DP0DP04 118 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 COX6A1P12074 109 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 B3GALT5-AS1P59052 145 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 CACNA1DQ01668 2161 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 TEX29Q8N6K0 151 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 Q8TCH9 128 aa15.02□□□□□ -0.01
RAB40C-206ENST00000561781 IGHV3-64DA0A0J9YX35 117 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 DEFB108AA8MXU0 73 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 HAX1O00165 279 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 P01737 135 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 Q0VFX4 171 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms