RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 TRAV30A0A087WSZ9 112 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 S100A8P05109 93 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 GP9P14770 177 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 CAV2P51636 162 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
RPL28-211ENST00000560881 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 ZNF90Q03938 601 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 NMES1Q9C002 83 aa12.58□□□□□ -0.4
RPL28-211ENST00000560881 FAM24AA6NFZ4 105 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 ZFP92A6NM28 416 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 APOHP02749 345 aaPredicted RBP12.57□□□□□ -0.4
RPL28-211ENST00000560881 C8orf88P0DMB2 117 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 CBLN2Q8IUK8 224 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 LINC00469Q8N7U9 141 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 PPP1R1CQ8WVI7 109 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 OR5AC2Q9NZP5 309 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
RPL28-211ENST00000560881 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 H0YIZ8 118 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 SCGB2A1O75556 95 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 DEDDO75618 318 aa12.57□□□□□ -0.4
RPL28-211ENST00000560881 SCAF4O95104 1147 aaKnown RBP12.57□□□□□ -0.4
RPL28-211ENST00000560881 IGSF23A1L1A6 192 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 K7EMT4 169 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 CST7O76096 145 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 PSG1P11464 419 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 RAB5BP61020 215 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 YPEL3P61236 119 aaPredicted RBP12.56□□□□□ -0.4
RPL28-211ENST00000560881 AKR1C1Q04828 323 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 LCN12Q6JVE5 192 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 OR10P1Q8NGE3 313 aa12.56□□□□□ -0.4
RPL28-211ENST00000560881 IGHV7-4-1A0A0J9YVY3 117 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 TOMM40O96008 361 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 IL4P05112 153 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 SPP1P10451 314 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 USF2Q15853 346 aaPredicted RBP12.55□□□□□ -0.4
RPL28-211ENST00000560881 TMEM217Q8N7C4 229 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 THAP8Q8NA92 274 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 SAT2Q96F10 170 aaPredicted RBP12.55□□□□□ -0.4
RPL28-211ENST00000560881 GINS3Q9BRX5 216 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 LYRM2Q9NU23 88 aaPredicted RBP12.55□□□□□ -0.4
RPL28-211ENST00000560881 TECRQ9NZ01 308 aaKnown RBP12.55□□□□□ -0.4
RPL28-211ENST00000560881 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
RPL28-211ENST00000560881 CHEK1O14757 476 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
RPL28-211ENST00000560881 BAP18Q8IXM2 172 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 LILRB2Q8N423 598 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 Q8WTZ3 238 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 RNF2Q99496 336 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 TCEAL7Q9BRU2 100 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 RHPN1-AS1Q9BWJ2 59 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 ZNF785A8K8V0 405 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 S100A9P06702 114 aaKnown RBP12.54□□□□□ -0.4
RPL28-211ENST00000560881 GATA2P23769 480 aaPredicted RBP12.54□□□□□ -0.4
RPL28-211ENST00000560881 DLK1P80370 383 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 PEA15Q15121 130 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 TMEM182Q6ZP80 229 aaPredicted RBP12.54□□□□□ -0.4
RPL28-211ENST00000560881 TMEM252Q8N6L7 170 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 OR51G1Q8NGK1 321 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 RXFP4Q8TDU9 374 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 TREM1Q9NP99 234 aa12.54□□□□□ -0.4
RPL28-211ENST00000560881 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.45e-18■□□□□ 10.2
RPL28-211ENST00000560881 SLC38A11Q08AI6 406 aa12.53□□□□□ -0.4
RPL28-211ENST00000560881 C15orf54Q8N8G6 183 aa12.53□□□□□ -0.4
RPL28-211ENST00000560881 OR2K2Q8NGT1 345 aa12.53□□□□□ -0.4
RPL28-211ENST00000560881 TRGV9Q99603 122 aa12.53□□□□□ -0.4
RPL28-211ENST00000560881 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
RPL28-211ENST00000560881 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 LYL1P12980 280 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.4
RPL28-211ENST00000560881 RNF212Q495C1 297 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 DEFB121Q5J5C9 76 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 METTL26Q96S19 204 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 RNF126Q9BV68 326 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 PBDC1Q9BVG4 233 aa12.52□□□□□ -0.4
RPL28-211ENST00000560881 COLCA2A8K830 154 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 UBE2CO00762 179 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 FABP1P07148 127 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 CD7P09564 240 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 NPPCP23582 126 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 CRYBB3P26998 211 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 LYZP61626 148 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 RBPMS2Q6ZRY4 209 aaKnown RBP12.51□□□□□ -0.41
RPL28-211ENST00000560881 RNF125Q96EQ8 232 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 LSM4Q9Y4Z0 139 aaKnown RBP12.51□□□□□ -0.41
RPL28-211ENST00000560881 C1orf196B1AJZ1 125 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 E5RGE8 158 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 SULT1A1P50225 295 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 NHLH2Q02577 135 aa12.51□□□□□ -0.41
RPL28-211ENST00000560881 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
RPL28-211ENST00000560881 Q8N1Y9 231 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms