RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MRAP2Q96G30 205 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 SSBP3Q9BWW4 388 aaPredicted RBP4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 RABAC1Q9UI14 185 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 EPDR1Q9UM22 224 aa4.78□□□□□ -1.64
SNRPA1-209ENST00000560307 TET2Q6N021 2002 aaPredicted RBP4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 C17orf100A8MU93 164 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 UPK2O00526 184 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 MGST3O14880 152 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 COX7A2P2O60397 106 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 PROP1O75360 226 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 MT-CO3P00414 261 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 CA1P00915 261 aaPredicted RBP4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 LTAP01374 205 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 IGHV3-7P01780 117 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 RFPL3SP0C7P2 107 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 SMIM13P0DJ93 91 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 AESQ08117 197 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 ATP6V0E2Q8NHE4 81 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 NEU4Q8WWR8 484 aaPredicted RBP4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 FXYD5Q96DB9 178 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 VGLL1Q99990 258 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 VCX2Q9H322 139 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 DKK2Q9UBU2 259 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 HCFC1P51610 2035 aa4.77□□□□□ -1.65
SNRPA1-209ENST00000560307 IGKV1OR2-108A0A075B7D4 117 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 TRAV3A0A0B4J244 114 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 IGHV5-10-1A0A0J9YXX1 117 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 TCRBV4S1A1TA0A5B7 111 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 LINC01619G3V211 115 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 LINC01565O15544 149 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 SLC25A17O43808 307 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 GNG7O60262 68 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 CELA2AP08217 269 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 CCL2P13500 99 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 EDN2P20800 178 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 SUB1P53999 127 aaKnown RBP eCLIP4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 MFAP4P55083 255 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 GUSBP1Q15486 140 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 C5orf64Q2M2E5 130 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 ABHD17BQ5VST6 288 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 C10orf113Q5VZT2 155 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 Q6ZR03 302 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 ZNF493Q6ZR52 646 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 PDPNQ86YL7 162 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 GTSF1Q8WW33 167 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 PCSK5Q92824 1860 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 DAZAP1Q96EP5 407 aaKnown RBP4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 SRSF8Q9BRL6 282 aaKnown RBP4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 B4GALT7Q9UBV7 327 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 PILRBQ9UKJ0 227 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 U3KQK5 164 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 ESPL1Q14674 2120 aa4.76□□□□□ -1.65
SNRPA1-209ENST00000560307 IGHV3-43A0A0B4J1X8 118 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 A0A1B0GUT8 65 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 hADV38S2A0JD32 116 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 E9PLD3 99 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 FSTL3O95633 263 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 SLC25A5P05141 298 aaKnown RBP4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 IGHV3-43DP0DP04 118 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 CFHR2P36980 270 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 UQCRFS1P47985 274 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 FABP6P51161 128 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 CKS1BP61024 79 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 ERHP84090 104 aaKnown RBP4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 SRYQ05066 204 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 Q86TA4 180 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 MDP1Q86V88 176 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 TUSC5Q8IXB3 177 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 C11orf53Q8IXP5 236 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 SLC25A45Q8N413 288 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 SMRP1Q8NCR6 262 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 OR10X1Q8NGY0 326 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 ITLN1Q8WWA0 313 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 FAM173AQ9BQD7 235 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 TM2D2Q9BX73 214 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 SPANXB1Q9NS25 103 aaPredicted RBP4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 GNG12Q9UBI6 72 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 TSSC4Q9Y5U2 329 aaPredicted RBP4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 ABCA7Q8IZY2 2146 aa4.75□□□□□ -1.65
SNRPA1-209ENST00000560307 A0A1W2PRD5 423 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 A0A1W2PRF3 423 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 A0A1W2PRM7 423 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 LINC01546A6NGU7 62 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 FBLL1A6NHQ2 334 aaKnown RBP4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 OR11H12B2RN74 326 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 USP17L23D6RBM5 183 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 KLF7O75840 302 aaPredicted RBP4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 MOSP00540 346 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 IGHV3-9P01782 118 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 HBDP02042 147 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 CGB3P0DN86 165 aa4.74□□□□□ -1.65
SNRPA1-209ENST00000560307 CGB7P0DN87 165 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms