RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 CTDSP1Q9GZU7 261 aa8.76□□□□□ -1.01
USP3-218ENST00000560202 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
USP3-218ENST00000560202 SLC45A2Q9UMX9 530 aa8.76□□□□□ -1.01
USP3-218ENST00000560202 PUS1Q9Y606 427 aaKnown RBP eCLIP8.76□□□□□ -1.01
USP3-218ENST00000560202 PXMP4Q9Y6I8 212 aa8.76□□□□□ -1.01
USP3-218ENST00000560202 HIVEP2P31629 2446 aa8.76□□□□□ -1.01
USP3-218ENST00000560202 TRBV24-1A0A075B6N3 115 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 H3BUA1 57 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 RNASE1P07998 156 aaKnown RBP8.75□□□□□ -1.01
USP3-218ENST00000560202 RD3LP0DJH9 198 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 FHITP49789 147 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 MFAP4P55083 255 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 HILS1P60008 231 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 PRR20EP86478 221 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 PRR20CP86479 221 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 PRR20DP86480 221 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 PRR20BP86481 221 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 PRR20AP86496 221 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 C15orf32Q32M92 178 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 FFAR4Q5NUL3 377 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 MIC13Q5XKP0 118 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 CYP2G1PQ6ZSU1 146 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 TMEM183AQ8IXX5 376 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 VN1R17PQ8TDU5 208 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 Q8WTZ3 238 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 VSIRQ9H7M9 311 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 C21orf62Q9NYP8 219 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 S4R3C0 116 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 TRAV1-1A0A0B4J248 108 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 TCRBV4S1A1TA0A5B7 111 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 IGLV1-40P01703 118 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 MBP02144 154 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 TRGV3P03979 118 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 SRP19P09132 144 aaKnown RBP8.75□□□□□ -1.01
USP3-218ENST00000560202 ZNF90Q03938 601 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 TMEM41BQ5BJD5 291 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 STPG3Q8N7X2 389 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 FAM213BQ8TBF2 198 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 FAM210BQ96KR6 192 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 TRGV9Q99603 122 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 GPR61Q9BZJ8 451 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 RPRMQ9NS64 109 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 SLC39A9Q9NUM3 307 aa8.75□□□□□ -1.01
USP3-218ENST00000560202 FAM223BA6NKX1 122 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 F8W735 103 aaPredicted RBP8.74□□□□□ -1.01
USP3-218ENST00000560202 IGHV3-23P01764 117 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 LINC00869P0C866 280 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 IGLC1P0CG04 106 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
USP3-218ENST00000560202 FCGR2BP31994 310 aaPredicted RBP8.74□□□□□ -1.01
USP3-218ENST00000560202 GAGE1Q13065 139 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 USF2Q15853 346 aaPredicted RBP8.74□□□□□ -1.01
USP3-218ENST00000560202 HAGHQ16775 308 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 ACOT6Q3I5F7 207 aaPredicted RBP8.74□□□□□ -1.01
USP3-218ENST00000560202 Q56UQ5 140 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 ZNF329Q86UD4 541 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 FAM223AQ8IWN6 122 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 JMJD8Q96S16 334 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 TXN2Q99757 166 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 HIST1H2BLQ99880 126 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 VAX2Q9UIW0 290 aa8.74□□□□□ -1.01
USP3-218ENST00000560202 TRAV30A0A087WSZ9 112 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 GNG7O60262 68 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 CRLF1O75462 422 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 IGHG4P01861 327 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 TRGC1P0CF51 173 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 PF4V1P10720 104 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 FABP4P15090 132 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 TPPP2P59282 170 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 RPL15P61313 204 aaKnown RBP8.73□□□□□ -1.01
USP3-218ENST00000560202 SELENOTP62341 195 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 ATP5G2Q06055 141 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 GCSAMLQ5JQS6 135 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 Q6ZSV7 163 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 OR10G9Q8NGN4 311 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 OR10G7Q8NGN6 311 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 ZNF502Q8TBZ5 544 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 EEF1AKMT3Q96AZ1 226 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 KLK15Q9H2R5 256 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 SERTAD4Q9NUC0 356 aa8.73□□□□□ -1.01
USP3-218ENST00000560202 TMEM89A2RUT3 159 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 PSMB11A5LHX3 300 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 PPP5D1E7EU14 171 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 IGKV1-17P01599 117 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 TRGC2P03986 189 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 CXCL1P09341 107 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 LINC00614P0C842 121 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 RAB9AP51151 201 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 SLC35B1P78383 322 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 TIGITQ495A1 244 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 RPP25LQ8N5L8 163 aaKnown RBP8.72□□□□□ -1.01
USP3-218ENST00000560202 USMG5Q96IX5 58 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 TRBV7-1A0A0A6YYK4 115 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 OR2T8A6NH00 312 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 M0R143 59 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 PSMB8P28062 276 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 ZNF726P1Q15940 193 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 C10orf99Q6UWK7 81 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms