RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
PCAT29-201ENST00000558411 ZNF414Q96IQ9 312 aa9.01□□□□□ -0.97
PCAT29-201ENST00000558411 SGK494Q96LW2 274 aa9.01□□□□□ -0.97
PCAT29-201ENST00000558411 NDUFA4L2Q9NRX3 87 aa9.01□□□□□ -0.97
PCAT29-201ENST00000558411 U3KQK5 164 aa9.01□□□□□ -0.97
PCAT29-201ENST00000558411 PCSK5Q92824 1860 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 IGKV1D-17A0A075B6S4 117 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 IGKV1D-37A0A075B6S9 117 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 E9PLD3 99 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 HBDP02042 147 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 MC5RP33032 325 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 CRYBA4P53673 196 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 PCP2Q8IVA1 136 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 BCL6BQ8N143 479 aaPredicted RBP9□□□□□ -0.97
PCAT29-201ENST00000558411 C12orf49Q9H741 205 aa9□□□□□ -0.97
PCAT29-201ENST00000558411 VSTM5A8MXK1 200 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 NKX2-8O15522 239 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 IGHV3-13P01766 116 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 GCSHP23434 173 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 IFI27P40305 119 aaPredicted RBP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 NMUP48645 174 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SSBP2P81877 361 aaPredicted RBP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SRSF1Q07955 248 aaKnown RBP eCLIP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 C17orf58Q2M2W7 97 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 ZCCHC24Q8N2G6 241 aaKnown RBP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 ZNF502Q8TBZ5 544 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SPAG8Q99932 426 aaPredicted RBP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 TM2D2Q9BX73 214 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 FSCN3Q9NQT6 498 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 DYSFO75923 2080 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 PRR33A8MZF0 331 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SRRM5B3KS81 715 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 K7EQM0 130 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SUB1P53999 127 aaKnown RBP eCLIP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 FXYD2P54710 66 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 SPINK14Q6IE38 97 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 INO80CQ6PI98 192 aaPredicted RBP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 DEFB123Q8N688 67 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 IFI27L1Q96BM0 104 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 Q9H3A6 140 aa8.99□□□□□ -0.97
PCAT29-201ENST00000558411 MRPL16Q9NX20 251 aaKnown RBP8.99□□□□□ -0.97
PCAT29-201ENST00000558411 KBTBD11-OT1A0A1B0GTJ5 212 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
PCAT29-201ENST00000558411 TIMM8AO60220 97 aaPredicted RBP8.98□□□□□ -0.97
PCAT29-201ENST00000558411 ARMS2P0C7Q2 107 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 SAA1P0DJI8 122 aaPredicted RBP8.98□□□□□ -0.97
PCAT29-201ENST00000558411 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 HOXB4P17483 251 aaPredicted RBP8.98□□□□□ -0.97
PCAT29-201ENST00000558411 PAX8Q06710 450 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 WFDC2Q14508 124 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 TMEM30BQ3MIR4 351 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 OTORQ9NRC9 128 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 FAM106CPP0CH98 169 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 GP9P14770 177 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 CFHR2P36980 270 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 FAM106AQ4KMX7 169 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 OSR1Q8TAX0 266 aaPredicted RBP8.98□□□□□ -0.97
PCAT29-201ENST00000558411 LEAP2Q969E1 77 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
PCAT29-201ENST00000558411 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
PCAT29-201ENST00000558411 MAGEA5P43359 124 aa8.97□□□□□ -0.97
PCAT29-201ENST00000558411 LOXL1Q08397 574 aaPredicted RBP8.97□□□□□ -0.97
PCAT29-201ENST00000558411 TTC9CQ8N5M4 171 aa8.97□□□□□ -0.97
PCAT29-201ENST00000558411 TTTY12Q9BZ98 90 aa8.97□□□□□ -0.97
PCAT29-201ENST00000558411 F11RQ9Y624 299 aaKnown RBP8.97□□□□□ -0.97
PCAT29-201ENST00000558411 WDFY4Q6ZS81 3184 aa8.97□□□□□ -0.97
PCAT29-201ENST00000558411 IGLL5B9A064 214 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 PLAUP00749 431 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 IGLV2-11P01706 119 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 IGKV1-16P04430 117 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 SRSF6Q13247 344 aaKnown RBP8.96□□□□□ -0.97
PCAT29-201ENST00000558411 TAL2Q16559 108 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 LINC01559Q495D7 138 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 UTF1Q5T230 341 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 CEND1Q8N111 149 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 CIARTQ8N365 385 aaPredicted RBP8.96□□□□□ -0.97
PCAT29-201ENST00000558411 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.97
PCAT29-201ENST00000558411 RITA1Q96K30 269 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 C18orf15Q96N68 181 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 ZMAT4Q9H898 229 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.97
PCAT29-201ENST00000558411 SPAARA0A1B0GVQ0 90 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 FBLL1A6NHQ2 334 aaKnown RBP8.96□□□□□ -0.98
PCAT29-201ENST00000558411 THBDP07204 575 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 CCL4P13236 92 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 Q6ZS92 163 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 LCNL1Q6ZST4 164 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 SAP25Q8TEE9 199 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 ZNF418Q8TF45 676 aaPredicted RBP8.96□□□□□ -0.98
PCAT29-201ENST00000558411 PRELID3AQ96N28 172 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 TRGV9Q99603 122 aa8.96□□□□□ -0.98
PCAT29-201ENST00000558411 D6R8Y8 96 aa8.95□□□□□ -0.98
PCAT29-201ENST00000558411 SLC25A17O43808 307 aa8.95□□□□□ -0.98
PCAT29-201ENST00000558411 NDUFS7O75251 213 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms