RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MARC2Q969Z3 335 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 TECRQ9NZ01 308 aaKnown RBP18.3■□□□□ 0.52
SIX4-203ENST00000556952 MRPL27Q9P0M9 148 aaKnown RBP18.3■□□□□ 0.52
SIX4-203ENST00000556952 PEF1Q9UBV8 284 aaKnown RBP18.3■□□□□ 0.52
SIX4-203ENST00000556952 A0A1B0GV50 99 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 HMGB3O15347 200 aaKnown RBP18.3■□□□□ 0.52
SIX4-203ENST00000556952 LGALS1P09382 135 aaKnown RBP18.3■□□□□ 0.52
SIX4-203ENST00000556952 KHDC3LQ587J8 217 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 MIR17HGQ75NE6 70 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 ZNF414Q96IQ9 312 aa18.3■□□□□ 0.52
SIX4-203ENST00000556952 BMPR1BO00238 502 aa18.29■□□□□ 0.52
SIX4-203ENST00000556952 CXorf1O96002 111 aa18.29■□□□□ 0.52
SIX4-203ENST00000556952 C8orf88P0DMB2 117 aa18.29■□□□□ 0.52
SIX4-203ENST00000556952 FGF8P55075 233 aaPredicted RBP18.29■□□□□ 0.52
SIX4-203ENST00000556952 SLC7A5P1Q8MH63 180 aa18.29■□□□□ 0.52
SIX4-203ENST00000556952 UHRF2Q96PU4 802 aa18.29■□□□□ 0.52
SIX4-203ENST00000556952 ZFAND3Q9H8U3 227 aa18.29■□□□□ 0.52
SIX4-203ENST00000556952 RAB19A4D1S5 217 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 ANKRD34BA5PLL1 514 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 GGCTO75223 188 aaKnown RBP18.28■□□□□ 0.52
SIX4-203ENST00000556952 EIF3GO75821 320 aaKnown RBP eCLIP18.28■□□□□ 0.52
SIX4-203ENST00000556952 TRBV12-3P01733 135 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 S100A7P31151 101 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 USF2Q15853 346 aaPredicted RBP18.28■□□□□ 0.52
SIX4-203ENST00000556952 TOMM20LQ6UXN7 152 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 SPATA3Q8NHX4 192 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 WFDC12Q8WWY7 111 aa18.28■□□□□ 0.52
SIX4-203ENST00000556952 CDX1P47902 265 aaPredicted RBP18.27■□□□□ 0.52
SIX4-203ENST00000556952 C12orf54Q6X4T0 127 aa18.27■□□□□ 0.52
SIX4-203ENST00000556952 PQLC2Q6ZP29 291 aa18.27■□□□□ 0.52
SIX4-203ENST00000556952 SLC25A39Q9BZJ4 359 aaPredicted RBP18.27■□□□□ 0.52
SIX4-203ENST00000556952 CLPSL1A2RUU4 121 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 NDUFA4O00483 81 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 ARL14EPLP0DKL9 152 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 CCL20P78556 96 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 PMS2P11Q13670 270 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 TCTEX1D4Q5JR98 221 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 EIF4E3Q8N5X7 224 aaKnown RBP18.26■□□□□ 0.51
SIX4-203ENST00000556952 RNF114Q9Y508 228 aa18.26■□□□□ 0.51
SIX4-203ENST00000556952 IGHV3-35A0A0C4DH35 117 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 PSMB3P49720 205 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 MORN5Q5VZ52 161 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 FAM210AQ96ND0 272 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 OR5B12Q96R08 314 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 SLC25A2Q9BXI2 301 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 RABAC1Q9UI14 185 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 RNF24Q9Y225 148 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 H3BRN7 92 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 PPT1P50897 306 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 STXBP6Q8NFX7 210 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 FAM167A-AS1Q96KT0 104 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 SHANK2-AS3Q9BTD1 123 aa18.25■□□□□ 0.51
SIX4-203ENST00000556952 IFNA1P01562 189 aa18.24■□□□□ 0.51
SIX4-203ENST00000556952 PROK1P58294 105 aa18.24■□□□□ 0.51
SIX4-203ENST00000556952 C4orf3Q8WVX3 66 aa18.24■□□□□ 0.51
SIX4-203ENST00000556952 A0A1B0GUS0 222 aa18.23■□□□□ 0.51
SIX4-203ENST00000556952 I3L521 148 aa18.23■□□□□ 0.51
SIX4-203ENST00000556952 OR7C2O60412 319 aa18.23■□□□□ 0.51
SIX4-203ENST00000556952 UQCC3Q6UW78 93 aa18.23■□□□□ 0.51
SIX4-203ENST00000556952 IQCF2Q8IXL9 164 aa18.23■□□□□ 0.51
SIX4-203ENST00000556952 MANBALQ9NQG1 85 aa18.23■□□□□ 0.51
SIX4-203ENST00000556952 GCHFRP30047 84 aa18.22■□□□□ 0.51
SIX4-203ENST00000556952 SCRT1Q9BWW7 348 aa18.22■□□□□ 0.51
SIX4-203ENST00000556952 TMEM167BQ9NRX6 74 aa18.22■□□□□ 0.51
SIX4-203ENST00000556952 GNG13Q9P2W3 67 aa18.22■□□□□ 0.51
SIX4-203ENST00000556952 TRAV5A0A0B4J249 113 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 TAGLN2P37802 199 aaKnown RBP18.21■□□□□ 0.51
SIX4-203ENST00000556952 GUK1Q16774 197 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 KHDC1LQ5JSQ8 128 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 ZNF503Q96F45 646 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 TMPRSS5Q9H3S3 457 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 HSPB1P04792 205 aaKnown RBP18.21■□□□□ 0.51
SIX4-203ENST00000556952 TOR2AQ5JU69 321 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 GPHB5Q86YW7 130 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 TMEM190Q8WZ59 177 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 METTL26Q96S19 204 aa18.21■□□□□ 0.51
SIX4-203ENST00000556952 RBFOX3A6NFN3 312 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 ZNF98A6NK75 572 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 HAX1O00165 279 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 BCL2P10415 239 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 RPEL1Q2QD12 228 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 FAM106AQ4KMX7 169 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 C3orf56Q8N813 242 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 CITED4Q96RK1 184 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 PAXXQ9BUH6 204 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 EIF5A2Q9GZV4 153 aaKnown RBP18.2■□□□□ 0.5
SIX4-203ENST00000556952 OR51M1Q9H341 326 aa18.2■□□□□ 0.5
SIX4-203ENST00000556952 CD28P10747 220 aa18.19■□□□□ 0.5
SIX4-203ENST00000556952 KRTAP10-3P60369 221 aa18.19■□□□□ 0.5
SIX4-203ENST00000556952 SUN5Q8TC36 379 aa18.19■□□□□ 0.5
SIX4-203ENST00000556952 C20orf24Q9BUV8 137 aa18.19■□□□□ 0.5
SIX4-203ENST00000556952 SMDT1Q9H4I9 107 aa18.19■□□□□ 0.5
SIX4-203ENST00000556952 TMEM14CQ9P0S9 112 aa18.19■□□□□ 0.5
SIX4-203ENST00000556952 IGHV4OR15-8A0A075B7B6 117 aa18.18■□□□□ 0.5
SIX4-203ENST00000556952 IGHV3OR16-8A0A075B7F1 116 aa18.18■□□□□ 0.5
SIX4-203ENST00000556952 A0A087WW49 117 aa18.18■□□□□ 0.5
SIX4-203ENST00000556952 GP9P14770 177 aa18.18■□□□□ 0.5
SIX4-203ENST00000556952 CRYBB3P26998 211 aa18.18■□□□□ 0.5
SIX4-203ENST00000556952 UBE2L3P68036 154 aaKnown RBP18.18■□□□□ 0.5
SIX4-203ENST00000556952 PEA15Q15121 130 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms