RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CTRB1P17538 263 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 ELK1P19419 428 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 NFYAP23511 347 aaPredicted RBP3.4□□□□□ -1.87
HIF1A-209ENST00000556827 GNG2P59768 71 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 CATR1Q13166 79 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 PRR4Q16378 134 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 CDNFQ49AH0 187 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 Q56UQ5 140 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 HES5Q5TA89 166 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 CTRB2Q6GPI1 263 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 THOC7Q6I9Y2 204 aaKnown RBP3.4□□□□□ -1.87
HIF1A-209ENST00000556827 SLC25A24Q6NUK1 477 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 CNIH2Q6PI25 160 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 Q6ZS49 121 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 LINC00336Q6ZUF6 198 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 Q6ZVH6 145 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 SSX9Q7RTT3 188 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 OR11H2Q8NH07 326 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 CD300LFQ8TDQ1 290 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 Q9H3A6 140 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 TAS2R8Q9NYW2 309 aa3.4□□□□□ -1.87
HIF1A-209ENST00000556827 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 IGLV11-55A0A075B6I3 123 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 OR2T8A6NH00 312 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 FAM74A7A6NL05 159 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 IFITM5A6NNB3 132 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 IGLL5B9A064 214 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 K7EMT4 169 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 DNASE2O00115 360 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 MFNGO00587 321 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 TGOLN2O43493 480 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 SCGB2A1O75556 95 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 SNAPC5O75971 98 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 HPRT1P00492 218 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 CA1P00915 261 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 HLA-DQB1P01920 261 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 CTSDP07339 412 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 GNAO1P09471 354 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 TRAPPC2P0DI81 140 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 TRAPPC2BP0DI82 140 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 OR13C7P0DN81 318 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 ANXA3P12429 323 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 NQO2P16083 231 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 CAMLGP49069 296 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 TAS2R31P59538 309 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 RPS25P62851 125 aaKnown RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 MLLT11Q13015 90 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 FAM74A3Q4VXF1 159 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM41BQ5BJD5 291 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 HACD4Q5VWC8 232 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 UNQ9165/PRO28630Q6UXU0 137 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 PUSL1Q8N0Z8 303 aaKnown RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 C14orf178Q8N769 122 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 UBAC2Q8NBM4 344 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 ZNF502Q8TBZ5 544 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM56Q96MV1 263 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 MGLLQ99685 303 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 HINT2Q9BX68 163 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 ZNF436Q9C0F3 470 aaPredicted RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 C11orf68Q9H3H3 251 aaKnown RBP3.39□□□□□ -1.87
HIF1A-209ENST00000556827 BET1LQ9NYM9 111 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 C21orf62Q9NYP8 219 aa3.39□□□□□ -1.87
HIF1A-209ENST00000556827 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 TRAV14DV4A0A0A6YYC5 116 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 TRAV1-2A0A0B4J238 106 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 H0Y9J4 135 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 UPK2O00526 184 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 RBFOX2O43251 390 aaKnown RBP eCLIP3.38□□□□□ -1.87
HIF1A-209ENST00000556827 SERPINE2P07093 398 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 RAB3BP20337 219 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 NPY1RP25929 384 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 S100GP29377 79 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 TFPI2P48307 235 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 OR2B8PP59922 312 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 RPL30P62888 115 aaKnown RBP3.38□□□□□ -1.87
HIF1A-209ENST00000556827 EWSR1Q01844 656 aaKnown RBP eCLIP3.38□□□□□ -1.87
HIF1A-209ENST00000556827 MSMO1Q15800 293 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 C2orf83Q53S99 150 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 AADACL3Q5VUY0 350 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM91Q6ZNR0 172 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 C19orf35Q6ZS72 473 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 TPRA1Q86W33 373 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 APRG1Q8IVJ8 170 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 GDPD1Q8N9F7 314 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 DUSP18Q8NEJ0 188 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 LSM10Q969L4 123 aaKnown RBP3.38□□□□□ -1.87
HIF1A-209ENST00000556827 NARS2Q96I59 477 aaKnown RBP3.38□□□□□ -1.87
HIF1A-209ENST00000556827 TSC22D3Q99576 134 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 GINS3Q9BRX5 216 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 RHPN1-AS1Q9BWJ2 59 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 FKBP14Q9NWM8 211 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 FKBP11Q9NYL4 201 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 SMPXQ9UHP9 88 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 ANXA10Q9UJ72 324 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 BLOC1S6Q9UL45 172 aa3.38□□□□□ -1.87
HIF1A-209ENST00000556827 LSM2Q9Y333 95 aaKnown RBP3.38□□□□□ -1.87
HIF1A-209ENST00000556827 IGHV3OR16-8A0A075B7F1 116 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 TRAV10A0A0B4J240 114 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms