RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 NKX2-1P43699 371 aaPredicted RBP6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 PCP4P48539 62 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 HOXA1P49639 335 aaPredicted RBP6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 SPCS3P61009 180 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 DHODHQ02127 395 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 C2orf83Q53S99 150 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 SLC35G3Q8N808 338 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 NARS2Q96I59 477 aaKnown RBP6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 HLA-DRB4X5D2U9 266 aa6.32□□□□□ -1.4
GTF2A1-204ENST00000556268 A0A0G2JRQ6 117 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 C3orf85A0A1B0GTC6 90 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 SMIM31A0A1B0GVY4 71 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 ATG12O94817 140 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 CDS2O95674 445 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 SLC25A4P12235 298 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 UCP1P25874 307 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 RCVRNP35243 200 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 OPRK1P41145 380 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 HTR2BP41595 481 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 PIGPP57054 158 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 SNRPD3P62318 126 aaKnown RBP6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 USF2Q15853 346 aaPredicted RBP6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 RNASEH2CQ8TDP1 164 aaKnown RBP6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 YIPF6Q96EC8 236 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 NRN1Q9NPD7 142 aa6.31□□□□□ -1.4
GTF2A1-204ENST00000556268 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 DNAH5Q8TE73 4624 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 IGLV2-18A0A075B6J9 118 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 SCGB2A1O75556 95 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 B3GALNT1O75752 331 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 RD3LP0DJH9 198 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 OR10J1P30954 320 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 NEDD8Q15843 81 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 SP6Q3SY56 376 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 SOHLH1Q5JUK2 328 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 GDF5OSQ5U4N7 250 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 ZNF709Q8N972 641 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 TERB2Q8NHR7 220 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 NIPSNAP3BQ9BS92 247 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 KLK11Q9UBX7 282 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 RFNGQ9Y644 331 aa6.3□□□□□ -1.4
GTF2A1-204ENST00000556268 PGAM2P15259 253 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 ELK1P19419 428 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 RND2P52198 227 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 AKR1C2P52895 323 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 ZNF79Q15937 498 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 SIGLEC15Q6ZMC9 328 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 SNX29P2Q8IUI4 249 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 FAM219AQ8IW50 185 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 C1orf158Q8N1D5 194 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 ARRDC1Q8N5I2 433 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 PRR26Q8N8Z3 221 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 GLYATL2Q8WU03 294 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 RRNAD1Q96FB5 475 aaKnown RBP6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 PDCD10Q9BUL8 212 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 SAV1Q9H4B6 383 aaPredicted RBP6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 Q9H521 79 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 ENY2Q9NPA8 101 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 MTFP1Q9UDX5 166 aa6.29□□□□□ -1.4
GTF2A1-204ENST00000556268 TEX13DA0A0J9YY54 714 aaPredicted RBP6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 A8MTW9 85 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 SOCS3O14543 225 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 GSTZ1O43708 216 aaPredicted RBP6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 IL4P05112 153 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 EMP1P54849 157 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 DEFB1P60022 68 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 NMSQ5H8A3 153 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 FAM222AQ5U5X8 452 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 SPATA31B1PQ5VZV4 182 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 FOXI2Q6ZQN5 318 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 SELENOHQ8IZQ5 122 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 LHFPL5Q8TAF8 219 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 ZFAND1Q8TCF1 268 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 GPR146Q96CH1 333 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 ABHD1Q96SE0 405 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 RTBDNQ9BSG5 229 aaPredicted RBP6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 TMEM222Q9H0R3 208 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 COMMD3Q9UBI1 195 aa6.28□□□□□ -1.4
GTF2A1-204ENST00000556268 CD3DP04234 171 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 TBPP20226 339 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 RORCP51449 518 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 PAX9P55771 341 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 LSM3P62310 102 aaKnown RBP6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 TRIM16LQ309B1 348 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 RNASE10Q5GAN6 216 aaKnown RBP6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 C1orf194Q5T5A4 169 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 NOXA1Q86UR1 476 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 UBE2DNLQ8IWF7 75 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 OR52I2Q8NH67 350 aa6.27□□□□□ -1.41
GTF2A1-204ENST00000556268 COPZ2Q9P299 210 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms