RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
VPS33B-205ENST00000556096 DERL1Q9BUN8 251 aa11.5□□□□□ -0.57
VPS33B-205ENST00000556096 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-205ENST00000556096 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 IGHG2P01859 326 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 IGF1P05019 195 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 SUMO1P63165 101 aaKnown RBP11.49□□□□□ -0.57
VPS33B-205ENST00000556096 LY6EQ16553 131 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 RNF212Q495C1 297 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 TMEM14CQ9P0S9 112 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 S4R3C0 116 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 ABCA1O95477 2261 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 TRAV41A0A0B4J266 112 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 CLDN34H7C241 214 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 FOLR2P14207 255 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 GP9P14770 177 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 ATF4P18848 351 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-205ENST00000556096 RHOGP84095 191 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 CYB5R2Q6BCY4 276 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 ZNF502Q8TBZ5 544 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 TCEAL7Q9BRU2 100 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 GAR1Q9NY12 217 aaKnown RBP11.49□□□□□ -0.57
VPS33B-205ENST00000556096 LY96Q9Y6Y9 160 aa11.49□□□□□ -0.57
VPS33B-205ENST00000556096 F8P00451 2351 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 C9JCJ5 164 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 H3BRN7 92 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 BRI3O95415 125 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 LY6G6DO95868 133 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 IL4P05112 153 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 CTSGP08311 255 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 NBEAP1P0C6P0 100 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 CRYBB3P26998 211 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 ANAPC16Q96DE5 110 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 ATP6V0BQ99437 205 aa11.48□□□□□ -0.57
VPS33B-205ENST00000556096 CSPG4Q6UVK1 2322 aa11.47□□□□□ -0.57
VPS33B-205ENST00000556096 TRBV20OR9-2A0A075B6H5 130 aa11.47□□□□□ -0.57
VPS33B-205ENST00000556096 MYCNOSP40205 109 aa11.47□□□□□ -0.57
VPS33B-205ENST00000556096 C2CD4CQ8TF44 421 aa11.47□□□□□ -0.57
VPS33B-205ENST00000556096 ELOVL1Q9BW60 279 aa11.47□□□□□ -0.57
VPS33B-205ENST00000556096 TRBV7-1A0A0A6YYK4 115 aa11.46□□□□□ -0.57
VPS33B-205ENST00000556096 HELTA6NFD8 242 aa11.46□□□□□ -0.57
VPS33B-205ENST00000556096 OR2T8A6NH00 312 aa11.46□□□□□ -0.57
VPS33B-205ENST00000556096 IGHV3-23P01764 117 aa11.46□□□□□ -0.57
VPS33B-205ENST00000556096 CRYBA1P05813 215 aa11.46□□□□□ -0.57
VPS33B-205ENST00000556096 ZNF329Q86UD4 541 aa11.46□□□□□ -0.57
VPS33B-205ENST00000556096 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
VPS33B-205ENST00000556096 TLN2Q9Y4G6 2542 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 ANK3Q12955 4377 aaKnown RBP11.46□□□□□ -0.58
VPS33B-205ENST00000556096 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 FAM223BA6NKX1 122 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 H3BUA1 57 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 HIST1H1EP10412 219 aaKnown RBP11.46□□□□□ -0.58
VPS33B-205ENST00000556096 RAB5AP20339 215 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 RPL35P42766 123 aaKnown RBP11.46□□□□□ -0.58
VPS33B-205ENST00000556096 ELOBQ15370 118 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 C9orf152Q5JTZ5 239 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 LEMD1Q68G75 181 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 TMEM190Q8WZ59 177 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 EEF1AKMT3Q96AZ1 226 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 RNF24Q9Y225 148 aa11.46□□□□□ -0.58
VPS33B-205ENST00000556096 ADMP35318 185 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 IER3P46695 156 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 USF2Q15853 346 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-205ENST00000556096 BPIFA4PQ86YQ2 179 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 OR5R1Q8NH85 324 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 CHRDL1Q9BU40 450 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 YAE1D1Q9NRH1 226 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 ZNF580Q9UK33 172 aa11.45□□□□□ -0.58
VPS33B-205ENST00000556096 H7BYZ3 331 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 PPP1R2P9O14990 202 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
VPS33B-205ENST00000556096 S100A7P31151 101 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 TAS2R60P59551 318 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 RANP62826 216 aaKnown RBP11.44□□□□□ -0.58
VPS33B-205ENST00000556096 BLCAPP62952 87 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 ATP5G2Q06055 141 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 TEP1Q99973 2627 aaKnown RBP11.44□□□□□ -0.58
VPS33B-205ENST00000556096 ZFHX3Q15911 3703 aa11.44□□□□□ -0.58
VPS33B-205ENST00000556096 LOC105371267A0A1B0GV96 52 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 ZNF98A6NK75 572 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 AP4M1O00189 453 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 IGHV4-59P01825 116 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 CLEC3BP05452 202 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 IL17RELQ6ZVW7 336 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 BLNKQ8WV28 456 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 CCDC140Q96MF4 163 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 MS4A10Q96PG2 267 aa11.43□□□□□ -0.58
VPS33B-205ENST00000556096 PGPA6NDG6 321 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms