RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 COQ2Q96H96 371 aa11.76□□□□□ -0.53
SIX1-205ENST00000555955 PRELID3AQ96N28 172 aa11.76□□□□□ -0.53
SIX1-205ENST00000555955 TNCP24821 2201 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 TFF1P04155 84 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 OR5AN1Q8NGI8 311 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 OR13A1Q8NGR1 328 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 OCIAD1Q9NX40 245 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 DOCK7Q96N67 2140 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 PGPA6NDG6 321 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 IGHV3-13P01766 116 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 CT45A10P0DMU9 189 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 COL8A1P27658 744 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 PROK2Q9HC23 129 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 KLF12Q9Y4X4 402 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 TNFRSF18Q9Y5U5 241 aa11.75□□□□□ -0.53
SIX1-205ENST00000555955 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 CELA2AP08217 269 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 FOXG1P55316 489 aaPredicted RBP11.74□□□□□ -0.53
SIX1-205ENST00000555955 SRYQ05066 204 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 C12orf74Q32Q52 190 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 IGHV1OR21-1A0A087WYE8 117 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
SIX1-205ENST00000555955 A0A1B0GUT8 65 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 GRPP07492 148 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 HOXA4Q00056 320 aaPredicted RBP11.74□□□□□ -0.53
SIX1-205ENST00000555955 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 GGNQ86UU5 652 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 FXYD5Q96DB9 178 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 CITED1Q99966 193 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
SIX1-205ENST00000555955 PRRG2O14669 202 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 MRPL33O75394 65 aaKnown RBP11.73□□□□□ -0.53
SIX1-205ENST00000555955 ARMS2P0C7Q2 107 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 Q6AWC8 147 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 DCTN5Q9BTE1 182 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 J3KRW8 73 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 ARL3P36405 182 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 C10orf113Q5VZT2 155 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 ZFAND6Q6FIF0 208 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 PDPNQ86YL7 162 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
SIX1-205ENST00000555955 AGRNO00468 2067 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 CEP192Q8TEP8 1941 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 NPIPB5A8MRT5 1133 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 SPINT2O43291 252 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 PLAUP00749 431 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 HBDP02042 147 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 IGFBP4P22692 258 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 MYCNOSP40205 109 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 ZNF562Q6V9R5 426 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 OR10X1Q8NGY0 326 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 FSCN3Q9NQT6 498 aa11.73□□□□□ -0.53
SIX1-205ENST00000555955 WNT9BO14905 357 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 PLP2Q04941 152 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 C17orf82Q86X59 251 aaPredicted RBP11.72□□□□□ -0.53
SIX1-205ENST00000555955 FZR1Q9UM11 496 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 TRBV20-1A0A075B6N2 111 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 CCDC179H3BU77 68 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 SCGB2A1O75556 95 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 RIGQ13278 110 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 RRN3P1Q2M238 152 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 MBNL2Q5VZF2 373 aaKnown RBP11.72□□□□□ -0.53
SIX1-205ENST00000555955 TEX29Q8N6K0 151 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 HARBI1Q96MB7 349 aa11.72□□□□□ -0.53
SIX1-205ENST00000555955 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.53
SIX1-205ENST00000555955 B3GALT5-AS1P59052 145 aa11.71□□□□□ -0.53
SIX1-205ENST00000555955 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.53
SIX1-205ENST00000555955 DOCK10Q96BY6 2186 aa11.71□□□□□ -0.53
SIX1-205ENST00000555955 DUX1O43812 170 aa11.71□□□□□ -0.54
SIX1-205ENST00000555955 NDUFS7O75251 213 aa11.71□□□□□ -0.54
SIX1-205ENST00000555955 PTH2Q96A98 100 aa11.71□□□□□ -0.54
SIX1-205ENST00000555955 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 ZNF766Q5HY98 468 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 PATE2Q6UY27 113 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 PRNDQ9UKY0 176 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 D6R8Y8 96 aa11.7□□□□□ -0.54
SIX1-205ENST00000555955 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
SIX1-205ENST00000555955 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
SIX1-205ENST00000555955 SMCPP49901 116 aaPredicted RBP11.69□□□□□ -0.54
SIX1-205ENST00000555955 ATP5J2P56134 94 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 KIR2DL4Q99706 377 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 TPPP3Q9BW30 176 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 IFI27L2Q9H2X8 130 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 OVOL3O00110 214 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 CD27P26842 260 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 FCER1GP30273 86 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 SRSF1Q07955 248 aaKnown RBP eCLIP11.69□□□□□ -0.54
SIX1-205ENST00000555955 CFAP126Q5VTH2 177 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 SFTA2Q6UW10 78 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms