RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MBP02144 154 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 OR5G3P0C626 314 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 ARL3P36405 182 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 YPEL3P61236 119 aaPredicted RBP7.88□□□□□ -1.15
SRP54-208ENST00000555557 KHDC1LQ5JSQ8 128 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 ZNF343Q6P1L6 599 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 LCN15Q6UWW0 184 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 RNF152Q8N8N0 203 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 OR51G1Q8NGK1 321 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 WIPF2Q8TF74 440 aaPredicted RBP7.88□□□□□ -1.15
SRP54-208ENST00000555557 RCC1LQ96I51 464 aaKnown RBP7.88□□□□□ -1.15
SRP54-208ENST00000555557 HRH4Q9H3N8 390 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 KCNIP2Q9NS61 270 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 PUS1Q9Y606 427 aaKnown RBP eCLIP7.88□□□□□ -1.15
SRP54-208ENST00000555557 OR2C1O95371 312 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 IL4P05112 153 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 CD28P10747 220 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 FGF8P55075 233 aaPredicted RBP7.87□□□□□ -1.15
SRP54-208ENST00000555557 RAB5BP61020 215 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 FAM78BQ5VT40 261 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 MORN5Q5VZ52 161 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 OR4F5Q8NH21 305 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 MYOZ3Q8TDC0 251 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 Q8WTZ3 238 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
SRP54-208ENST00000555557 A0A1W2PPV4 95 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 COX7A2P2O60397 106 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 CDC34P49427 236 aaPredicted RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 USF2Q15853 346 aaPredicted RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 GUCA2BQ16661 112 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 MIR17HGQ75NE6 70 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 COMMD1Q8N668 190 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 SAT2Q96F10 170 aaPredicted RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 UBE2E2Q96LR5 201 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 GAR1Q9NY12 217 aaKnown RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 PEF1Q9UBV8 284 aaKnown RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 TRAV5A0A0B4J249 113 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 WI2-2373I1.2A0A1W2PRP0 233 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 CLPSL1A2RUU4 121 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 BMPR1BO00238 502 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 HYPMO75409 117 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 FOLR2P14207 255 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 PROK1P58294 105 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 BLOC1S1P78537 153 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 CCL20P78556 96 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 RNF212Q495C1 297 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 C10orf91Q5T1B1 145 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 C10orf113Q5VZT2 155 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 TMEM88Q6PEY1 159 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 TOMM20LQ6UXN7 152 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 DPPA3Q6W0C5 159 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 LINC00305Q7Z4B0 112 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 RNF125Q96EQ8 232 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 ACTR3CQ9C0K3 210 aaPredicted RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 NIT2Q9NQR4 276 aa7.86□□□□□ -1.15
SRP54-208ENST00000555557 CARHSP1Q9Y2V2 147 aaKnown RBP7.86□□□□□ -1.15
SRP54-208ENST00000555557 A0A1W2PRX2 142 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 SCGB2A1O75556 95 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 PLP1P60201 277 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 DEFB136Q30KP8 78 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 LEMD1Q68G75 181 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 SPSB3Q6PJ21 355 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 OR1L4Q8NGR5 311 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 GATAD1Q8WUU5 269 aa7.85□□□□□ -1.15
SRP54-208ENST00000555557 CITED2Q99967 270 aaPredicted RBP7.85□□□□□ -1.15
SRP54-208ENST00000555557 MRPL27Q9P0M9 148 aaKnown RBP7.85□□□□□ -1.15
SRP54-208ENST00000555557 CTXND1A0A1B0GTU2 59 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 SEC14L6B5MCN3 397 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 ZNF207O43670 478 aaKnown RBP7.84□□□□□ -1.15
SRP54-208ENST00000555557 LGALS1P09382 135 aaKnown RBP7.84□□□□□ -1.15
SRP54-208ENST00000555557 CDX1P47902 265 aaPredicted RBP7.84□□□□□ -1.15
SRP54-208ENST00000555557 KRTAP10-3P60369 221 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 RHOBP62745 196 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 UNQ9165/PRO28630Q6UXU0 137 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 MBD3L1Q8WWY6 194 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 DUX3Q96PT4 197 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 ATP6V0BQ99437 205 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 PFDN5Q99471 154 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 C20orf24Q9BUV8 137 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 TMPRSS5Q9H3S3 457 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 FUT9Q9Y231 359 aa7.84□□□□□ -1.15
SRP54-208ENST00000555557 IGHV4OR15-8A0A075B7B6 117 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 A0A087WW49 117 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.16
SRP54-208ENST00000555557 C1orf196B1AJZ1 125 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 UBE2CO00762 179 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 GGCTO75223 188 aaKnown RBP7.84□□□□□ -1.16
SRP54-208ENST00000555557 SNRPCP09234 159 aaKnown RBP7.84□□□□□ -1.16
SRP54-208ENST00000555557 RELQ04864 619 aaPredicted RBP7.84□□□□□ -1.16
SRP54-208ENST00000555557 CBLN2Q8IUK8 224 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 KLHL30-AS1Q8NEE0 82 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 RXFP4Q8TDU9 374 aa7.84□□□□□ -1.16
SRP54-208ENST00000555557 SLC25A39Q9BZJ4 359 aaPredicted RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms