RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 H3BMM0 161 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 ISLRO14498 428 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 SELENOTP62341 195 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 OR8I2Q8N0Y5 310 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 Q8NAQ8 132 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 PHLDA1Q8WV24 401 aaPredicted RBP8.61□□□□□ -1.03
VRK1-204ENST00000555351 CCDC32Q9BV29 185 aa8.61□□□□□ -1.03
VRK1-204ENST00000555351 PAIP2BQ9ULR5 123 aaKnown RBP8.61□□□□□ -1.03
VRK1-204ENST00000555351 K7EPK0 472 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 SOCS3O14543 225 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 PLA2G10O15496 165 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 LYRM1O43325 122 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 TSC22D2O75157 780 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 ANXA7P20073 488 aaKnown RBP8.6□□□□□ -1.03
VRK1-204ENST00000555351 C4BPBP20851 252 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 GALR1P47211 349 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 POLR2GP62487 172 aaKnown RBP eCLIP8.6□□□□□ -1.03
VRK1-204ENST00000555351 DLK1P80370 383 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 OR2F1Q13607 317 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 FOXI2Q6ZQN5 318 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 ACOT7LQ6ZUV0 252 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 S100A7AQ86SG5 101 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 PPP1R14BQ96C90 147 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 PSENENQ9NZ42 101 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 TBC1D24Q9ULP9 559 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 RNF24Q9Y225 148 aa8.6□□□□□ -1.03
VRK1-204ENST00000555351 LINC00854A0A1B0GVQ3 168 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 ZNF98A6NK75 572 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 H3BP45 60 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 PAX9P55771 341 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 PLP1P60201 277 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 AKR1C1Q04828 323 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 IAH1Q2TAA2 248 aaPredicted RBP8.59□□□□□ -1.03
VRK1-204ENST00000555351 TMEM14EPQ6UXP3 125 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
VRK1-204ENST00000555351 OR1B1Q8NGR6 318 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 NEU1Q99519 415 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 WDR12Q9GZL7 423 aaKnown RBP8.59□□□□□ -1.03
VRK1-204ENST00000555351 C20orf85Q9H1P6 137 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 SAV1Q9H4B6 383 aaPredicted RBP8.59□□□□□ -1.03
VRK1-204ENST00000555351 X6R8D5 127 aa8.59□□□□□ -1.03
VRK1-204ENST00000555351 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 SSSCA1O60232 199 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 TCRBP04435 133 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 PXDC1Q5TGL8 231 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 OR10P1Q8NGE3 313 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 TMEM147Q9BVK8 224 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 NPVFQ9HCQ7 196 aa8.58□□□□□ -1.04
VRK1-204ENST00000555351 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 A8MTW9 85 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 RBMY1A1P0DJD3 496 aaKnown RBP8.57□□□□□ -1.04
VRK1-204ENST00000555351 RBMY1CP0DJD4 496 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
VRK1-204ENST00000555351 RBMY1FQ15415 496 aaKnown RBP8.57□□□□□ -1.04
VRK1-204ENST00000555351 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 TEPPQ6URK8 271 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 CYP2G1PQ6ZSU1 146 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 C2CD4CQ8TF44 421 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 S100ZQ8WXG8 99 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 SLC25A32Q9H2D1 315 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 RPRMQ9NS64 109 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 AGRNO00468 2067 aa8.57□□□□□ -1.04
VRK1-204ENST00000555351 DEDDO75618 318 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 LY6G6CO95867 125 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 IL5P05113 134 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 RPL7P18124 248 aaKnown RBP8.56□□□□□ -1.04
VRK1-204ENST00000555351 ORM2P19652 201 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 RAP2BP61225 183 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 ZNF846Q147U1 533 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 EBLN2Q6P2I7 272 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 ZNF705AQ6ZN79 300 aaPredicted RBP8.56□□□□□ -1.04
VRK1-204ENST00000555351 TMEM182Q6ZP80 229 aaPredicted RBP8.56□□□□□ -1.04
VRK1-204ENST00000555351 ZNF431Q8TF32 576 aaPredicted RBP8.56□□□□□ -1.04
VRK1-204ENST00000555351 LINC00052Q96N35 136 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 SHANK2-AS3Q9BTD1 123 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 MGAT4CQ9UBM8 478 aa8.56□□□□□ -1.04
VRK1-204ENST00000555351 RCL1Q9Y2P8 373 aaKnown RBP8.56□□□□□ -1.04
VRK1-204ENST00000555351 A0A0J9YX75 114 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 SMCO3A2RU48 225 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 C7orf66A4D0T2 115 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 TMEM189A5PLL7 270 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 ZNF705FA8MVS1 300 aaPredicted RBP8.55□□□□□ -1.04
VRK1-204ENST00000555351 H3BRN7 92 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 DEFB4AO15263 64 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 HYPMO75409 117 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 MBPP02686 304 aaPredicted RBP8.55□□□□□ -1.04
VRK1-204ENST00000555351 METTL15P1P0C7V9 234 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 ZNF705DP0CH99 300 aaPredicted RBP8.55□□□□□ -1.04
VRK1-204ENST00000555351 ZNF705BP0CI00 300 aaPredicted RBP8.55□□□□□ -1.04
VRK1-204ENST00000555351 GDF5OSQ5U4N7 250 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 ZNF546Q86UE3 836 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 RSG1Q9BU20 258 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 SLC25A39Q9BZJ4 359 aaPredicted RBP8.55□□□□□ -1.04
VRK1-204ENST00000555351 NUDT15Q9NV35 164 aa8.55□□□□□ -1.04
VRK1-204ENST00000555351 CLEC5AQ9NY25 188 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms