RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 LRCOL1A6NCL2 159 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 LY6LH3BQJ8 138 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 TCL1BO95988 128 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 CLPSP04118 112 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 HTR1AP08908 422 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 CRYGAP11844 174 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 PYDC2Q56P42 97 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 C4orf22Q6V702 233 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 TEX29Q8N6K0 151 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 C3orf56Q8N813 242 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 AQP3Q92482 292 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 LXNQ9BS40 222 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 TCEAL2Q9H3H9 227 aaPredicted RBP2.87□□□□□ -1.95
VRK1-203ENST00000555067 PAIP2BQ9ULR5 123 aaKnown RBP2.87□□□□□ -1.95
VRK1-203ENST00000555067 FER1L6Q2WGJ9 1857 aa2.87□□□□□ -1.95
VRK1-203ENST00000555067 PIK3C2AO00443 1686 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 A2MP01023 1474 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 IGHV1-58A0A0C4DH39 117 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 TRBV7-6A0A0J9YX20 115 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 CCDC160A6NGH7 325 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 LINC00587B1AMM8 73 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 SULT1C4O75897 302 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 MT-ND4LP03901 98 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 DYNLT1P63172 113 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 DPPA3Q6W0C5 159 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
VRK1-203ENST00000555067 LINC00305Q7Z4B0 112 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 OR51A4Q8NGJ6 313 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 NUP98P52948 1817 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 ARHGAP32A7KAX9 2087 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 GPR179Q6PRD1 2367 aa2.86□□□□□ -1.95
VRK1-203ENST00000555067 RIC1Q4ADV7 1423 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 A0A096LPI6 279 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 IGHV1-18A0A0C4DH31 117 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 A0A1W2PNM2 257 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 HIST1H2BKO60814 126 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 HIST1H2BJP06899 126 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 HLA-EP13747 358 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 CSRP1P21291 193 aaKnown RBP2.85□□□□□ -1.95
VRK1-203ENST00000555067 RPL35P42766 123 aaKnown RBP2.85□□□□□ -1.95
VRK1-203ENST00000555067 FXYD2P54710 66 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 NDUFA6P56556 154 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 DNAJB13P59910 316 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 RELAQ04206 551 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 DEFB134Q4QY38 66 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 PABPC1L2AQ5JQF8 200 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 EIF5AL1Q6IS14 154 aaKnown RBP2.85□□□□□ -1.95
VRK1-203ENST00000555067 SLC30A7Q8NEW0 376 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 CBLN4Q9NTU7 201 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 BAIAP2Q9UQB8 552 aa2.85□□□□□ -1.95
VRK1-203ENST00000555067 SCN8AQ9UQD0 1980 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 A0A0D9SG52 128 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 LRRC28Q86X40 367 aaPredicted RBP2.84□□□□□ -1.95
VRK1-203ENST00000555067 OR4E2Q8NGC2 313 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 ZNF714Q96N38 554 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 TAF9BQ9HBM6 251 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 HS3ST2Q9Y278 367 aa2.84□□□□□ -1.95
VRK1-203ENST00000555067 CPAMD8Q8IZJ3 1885 aa2.84□□□□□ -1.96
VRK1-203ENST00000555067 TRAV13-1A0A0B4J241 112 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 C7orf71A4D174 169 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 ODF3BA8MYP8 253 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 PAEPP09466 180 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 COX6A1P12074 109 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 EVI2AP22794 236 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 MYL5Q02045 173 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 KRTAP13-2Q52LG2 175 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 LCN15Q6UWW0 184 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 PATE2Q6UY27 113 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 AP1S3Q96PC3 154 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 OR5AC2Q9NZP5 309 aa2.83□□□□□ -1.96
VRK1-203ENST00000555067 MARCOQ9UEW3 520 aaPredicted RBP2.83□□□□□ -1.96
VRK1-203ENST00000555067 MEIKINA0A087WXM9 373 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 G3V3Q6 166 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 M0R2Z0 102 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 SDCBPO00560 298 aaPredicted RBP2.82□□□□□ -1.96
VRK1-203ENST00000555067 TIMM17BO60830 172 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 FUSP35637 526 aaKnown RBP eCLIP2.82□□□□□ -1.96
VRK1-203ENST00000555067 RAB5CP51148 216 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 TAF9Q16594 264 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 GLYATL3Q5SZD4 288 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 TMEM244Q5VVB8 128 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 LPAR5Q9H1C0 372 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 BCL2L10Q9HD36 194 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 DSPPQ9NZW4 1301 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 SCAF11Q99590 1463 aaKnown RBP2.82□□□□□ -1.96
VRK1-203ENST00000555067 WDR7Q9Y4E6 1490 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 TRPM1Q7Z4N2 1603 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 MYO16Q9Y6X6 1858 aa2.82□□□□□ -1.96
VRK1-203ENST00000555067 IGHV3-64A0A075B6Q5 118 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 H3BMG7 143 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 RER1O15258 196 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 TRGC1P0CF51 173 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 KDELR1P24390 212 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 RPL22P35268 128 aaKnown RBP2.81□□□□□ -1.96
VRK1-203ENST00000555067 NNATQ16517 81 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 LY6EQ16553 131 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 TMEM14EPQ6UXP3 125 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 Q6ZQT0 140 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms