RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SPINT2O43291 252 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 EDDM3AQ14507 147 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 PCP2Q8IVA1 136 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 CD177Q8N6Q3 437 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 OR8A1Q8NGG7 326 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
SYNE3-203ENST00000554873 FAM234AQ9H0X4 552 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 F11RQ9Y624 299 aaKnown RBP12.62□□□□□ -0.39
SYNE3-203ENST00000554873 GPR179Q6PRD1 2367 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 TRAV3A0A0B4J244 114 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 PRSS22Q9GZN4 317 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 GFRA4Q9GZZ7 299 aa12.62□□□□□ -0.39
SYNE3-203ENST00000554873 NMUP48645 174 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 TCTAP57738 103 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 LINC00312Q9Y6C7 94 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 COL6A3P12111 3177 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 K7ERJ3 54 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 SLC25A17O43808 307 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 INSL3P51460 131 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 FAM167A-AS1Q96KT0 104 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 TIMM8AO60220 97 aaPredicted RBP12.61□□□□□ -0.39
SYNE3-203ENST00000554873 HIGD1BQ9P298 99 aa12.61□□□□□ -0.39
SYNE3-203ENST00000554873 GAGE13Q4V321 117 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 RPL39P5Q59GN2 51 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 ATP1A1-AS1Q5TC04 95 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 C1orf210Q8IVY1 113 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 C20orf78Q9BR46 151 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 TMEM140Q9NV12 185 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 GNG12Q9UBI6 72 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 H3BMG7 143 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 P01737 135 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 PRDX2P32119 198 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 GAGE5Q13069 117 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 GAGE6Q13070 117 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 PRSS3P2Q8NHM4 247 aa12.6□□□□□ -0.39
SYNE3-203ENST00000554873 hADV38S2A0JD32 116 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 ZNF134P52741 427 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 CACNG7P62955 275 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 KLRD1Q13241 179 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 FAM90A1Q86YD7 464 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 FAM110AQ9BQ89 295 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 CDIP1Q9H305 208 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 HAX1O00165 279 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 Q6ZT83 130 aa12.59□□□□□ -0.39
SYNE3-203ENST00000554873 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-203ENST00000554873 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
SYNE3-203ENST00000554873 HEATR1Q9H583 2144 aaKnown RBP12.58□□□□□ -0.39
SYNE3-203ENST00000554873 IGKV1OR2-108A0A075B7D4 117 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 TCRBV4S1A1TA0A5B7 111 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 IGLL5B9A064 214 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 IGKV3-15P01624 115 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 CT45A10P0DMU9 189 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 C1orf122Q6ZSJ8 110 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 C15orf61A6NNL5 157 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
SYNE3-203ENST00000554873 LINC00322Q6ZN03 302 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-203ENST00000554873 C1orf229Q6ZS94 237 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-203ENST00000554873 NHP2Q9NX24 153 aaKnown RBP12.58□□□□□ -0.4
SYNE3-203ENST00000554873 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
SYNE3-203ENST00000554873 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 MORN5Q5VZ52 161 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 CNEP1R1Q8N9A8 125 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 MLST8Q9BVC4 326 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 SSBP2P81877 361 aaPredicted RBP12.57□□□□□ -0.4
SYNE3-203ENST00000554873 UTF1Q5T230 341 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 S1PR3Q99500 378 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 NCOR1O75376 2440 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 IGKV1D-17A0A075B6S4 117 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 A0A096LNJ9 63 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 MT-ATP8P03928 68 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 LOXL3P58215 753 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 HSPE1P61604 102 aaKnown RBP12.57□□□□□ -0.4
SYNE3-203ENST00000554873 HERV-K104P63124 156 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 PAXXQ9BUH6 204 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 ARRDC1-AS1Q9H2J1 176 aa12.57□□□□□ -0.4
SYNE3-203ENST00000554873 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 APOMO95445 188 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 CECR9P0C854 216 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 PYYP10082 97 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 GNG5P63218 68 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 LCNL1Q6ZST4 164 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 MOB3BQ86TA1 216 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 ZNF414Q96IQ9 312 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 ANAPC13Q9BS18 74 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 CHAC1Q9BUX1 264 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 ZNF883P0CG24 379 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 DAZAP1Q96EP5 407 aaKnown RBP12.56□□□□□ -0.4
SYNE3-203ENST00000554873 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
SYNE3-203ENST00000554873 FOXI1Q12951 378 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms