RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 LINC00052Q96N35 136 aa3.32□□□□□ -1.88
ATXN3-229ENST00000554672 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
ATXN3-229ENST00000554672 TMEM208Q9BTX3 173 aa3.32□□□□□ -1.88
ATXN3-229ENST00000554672 SAV1Q9H4B6 383 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-229ENST00000554672 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-229ENST00000554672 A0A0A6YYH2 397 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 A6NJ64 397 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 INS-IGF2F8WCM5 200 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 BUB3O43684 328 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 GSTZ1O43708 216 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-229ENST00000554672 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 RLN1P04808 185 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 RAB3BP20337 219 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 ERVFC1-1P60608 527 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 HERV-K104P61576 105 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 ZNF79Q15937 498 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 ESRGQ1W209 222 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 TIGITQ495A1 244 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 DHRS11Q6UWP2 260 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 SIGLEC15Q6ZMC9 328 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 H2BFWTQ7Z2G1 175 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 TMEM17Q86X19 198 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 SLC35B3Q9H1N7 401 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 SCPEP1Q9HB40 452 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 FAM212BQ9NTI7 297 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-229ENST00000554672 TXNL4BQ9NX01 149 aaKnown RBP3.31□□□□□ -1.88
ATXN3-229ENST00000554672 ZNF586Q9NXT0 402 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 KLK11Q9UBX7 282 aa3.31□□□□□ -1.88
ATXN3-229ENST00000554672 TRAV18A0A075B6X5 111 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 ZNF705GA8MUZ8 300 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 GPR31O00270 319 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 MYL9P24844 172 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 TSPOP30536 169 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 OPRK1P41145 380 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 PSMB3P49720 205 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 RORCP51449 518 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 PAX9P55771 341 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 LINC00315P59091 139 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 DEFB1P60022 68 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 YPEL3P61236 119 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 DHODHQ02127 395 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 TMEM69Q5SWH9 247 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 DGAT2L7PQ6IED9 249 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 OR5AP2Q8NGF4 316 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 OR4C16Q8NGL9 310 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 OR6F1Q8NGZ6 308 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 RXFP4Q8TDU9 374 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 DEFB104AQ8WTQ1 72 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 CNBD2Q96M20 576 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 UHRF2Q96PU4 802 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 ABHD1Q96SE0 405 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 Q9H521 79 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 FNDC4Q9H6D8 234 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 AAMDCQ9H7C9 122 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 MRPL36Q9P0J6 103 aaKnown RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 ANAPC10Q9UM13 185 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 MRPS16Q9Y3D3 137 aaKnown RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-229ENST00000554672 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATXN3-229ENST00000554672 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 A0A087WTM6 91 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 A0A0J9YX75 114 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 IFITM10A6NMD0 228 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 H3BNG1 76 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 PRM2P04554 102 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 IL4P05112 153 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 IGLC1P0CG04 106 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 RNASE2P10153 161 aaKnown RBP3.29□□□□□ -1.88
ATXN3-229ENST00000554672 SLC25A4P12235 298 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 M6PRP20645 277 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 PSMB9P28065 219 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 S100GP29377 79 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 NUP62P37198 522 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-229ENST00000554672 ETV6P41212 452 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 CBX5P45973 191 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 OR5I1Q13606 314 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 FCN2Q15485 313 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 C22orf42Q6IC83 251 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 LPCAT3Q6P1A2 487 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 SFXN4Q6P4A7 337 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 PRSS54Q6PEW0 395 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 GPR141Q7Z602 305 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 CROCCP3Q8IVE0 287 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 SLC25A38Q96DW6 304 aa3.29□□□□□ -1.88
ATXN3-229ENST00000554672 ZNF2Q9BSG1 426 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms