RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TRAV1-2A0A0B4J238 106 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 A0A0J9YY99 117 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 FAM25EA8MYX2 175 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 F6UB75 175 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 TRIAP1O43715 76 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 SCGB2A1O75556 95 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 RAB3BP20337 219 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 PSMA1P25786 263 aaKnown RBP3.68□□□□□ -1.82
HOXB3-213ENST00000552000 OPRK1P41145 380 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 OR5I1Q13606 314 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF79Q15937 498 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 ESRGQ1W209 222 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 IZUMO4Q1ZYL8 232 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 RNASE12Q5GAN4 147 aaKnown RBP3.68□□□□□ -1.82
HOXB3-213ENST00000552000 FAM78BQ5VT40 261 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 H2BFWTQ7Z2G1 175 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 HOGA1Q86XE5 327 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 OR4C16Q8NGL9 310 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 OR4X1Q8NH49 305 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 FCGR1BQ92637 280 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 SEC22AQ96IW7 307 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 UPK3BQ9BT76 320 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 ACOT13Q9NPJ3 140 aa3.68□□□□□ -1.82
HOXB3-213ENST00000552000 MRPS16Q9Y3D3 137 aaKnown RBP3.68□□□□□ -1.82
HOXB3-213ENST00000552000 STRAPQ9Y3F4 350 aaKnown RBP3.68□□□□□ -1.82
HOXB3-213ENST00000552000 TRAV18A0A075B6X5 111 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 A0A087WTM6 91 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 A0A0J9YX75 114 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 C5orf52A6NGY3 159 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 CBY3A6NI87 242 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 EBAG9O00559 213 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 BUB3O43684 328 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 GSTZ1O43708 216 aaPredicted RBP3.67□□□□□ -1.82
HOXB3-213ENST00000552000 MBPP02686 304 aaPredicted RBP3.67□□□□□ -1.82
HOXB3-213ENST00000552000 IL4P05112 153 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 IGLC1P0CG04 106 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 RNASE2P10153 161 aaKnown RBP3.67□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF182P17025 639 aaPredicted RBP3.67□□□□□ -1.82
HOXB3-213ENST00000552000 MYL9P24844 172 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 OR10J1P30954 320 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 ID1P41134 155 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 DHODHQ02127 395 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 MLLT11Q13015 90 aaPredicted RBP3.67□□□□□ -1.82
HOXB3-213ENST00000552000 EBLN2Q6P2I7 272 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 C10orf67Q8IYJ2 551 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 SLC35G3Q8N808 338 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 OR1S2Q8NGQ3 325 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 OR6F1Q8NGZ6 308 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 COQ8AQ8NI60 647 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 RXFP4Q8TDU9 374 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 Q8WTZ3 238 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 BORCS5Q969J3 196 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 GNPNAT1Q96EK6 184 aaPredicted RBP3.67□□□□□ -1.82
HOXB3-213ENST00000552000 IGF2BP2-AS1Q96M15 143 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 DAPK2Q9UIK4 370 aa3.67□□□□□ -1.82
HOXB3-213ENST00000552000 TRAV30A0A087WSZ9 112 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 PLAC8L1A1L4L8 177 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 MEIS3P1A6NDR6 274 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 C5orf51A6NDU8 294 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 M0R2Z0 102 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 CORTO00230 105 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 GPR31O00270 319 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 SCGNO76038 276 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 INSP01308 110 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 IGKV1-39P01597 117 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 IGKV1D-39P04432 117 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 ELK1P19419 428 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 ANXA7P20073 488 aaKnown RBP3.66□□□□□ -1.82
HOXB3-213ENST00000552000 AZU1P20160 251 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 TSPOP30536 169 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 ETV6P41212 452 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 RFX2P48378 723 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 PSMB3P49720 205 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 RND2P52198 227 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 SUB1P53999 127 aaKnown RBP eCLIP3.66□□□□□ -1.82
HOXB3-213ENST00000552000 PAX9P55771 341 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 YPEL3P61236 119 aaPredicted RBP3.66□□□□□ -1.82
HOXB3-213ENST00000552000 PHLDA2Q53GA4 152 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 CMTM1Q8IZ96 169 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 OR5AP2Q8NGF4 316 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 OR51G1Q8NGK1 321 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 MRGPRFQ96AM1 343 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 GPR146Q96CH1 333 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 MGLLQ99685 303 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF2Q9BSG1 426 aaPredicted RBP3.66□□□□□ -1.82
HOXB3-213ENST00000552000 FXYD6Q9H0Q3 95 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 RHBDL2Q9NX52 303 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 DOK5Q9P104 306 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 MGAT4CQ9UBM8 478 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 KLK11Q9UBX7 282 aa3.66□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF701M0R085 212 aaPredicted RBP3.65□□□□□ -1.83
HOXB3-213ENST00000552000 SOCS3O14543 225 aa3.65□□□□□ -1.83
HOXB3-213ENST00000552000 SIVA1O15304 175 aa3.65□□□□□ -1.83
HOXB3-213ENST00000552000 CRXO43186 299 aaPredicted RBP3.65□□□□□ -1.83
HOXB3-213ENST00000552000 PMP2P02689 132 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms