RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ATP5G2Q06055 141 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 FLOT2Q14254 428 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 GPR176Q14439 515 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 CDK10Q15131 360 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 SSX1Q16384 188 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 BSXQ3C1V8 233 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 LCE1FQ5T754 118 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 UQCC3Q6UW78 93 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 SSX9Q7RTT3 188 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 APRG1Q8IVJ8 170 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF709Q8N972 641 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 OR51S1Q8NGJ8 323 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 OR4A4PQ8NGN8 299 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 CYGBQ8WWM9 190 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 CHCHD10Q8WYQ3 142 aaPredicted RBP1.58□□□□□ -2.16
CPSF6-207ENST00000551516 PHYHIPLQ96FC7 376 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 GALNT14Q96FL9 552 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 ARHGAP5-AS1Q96IT6 56 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 TSNAXQ99598 290 aaKnown RBP1.58□□□□□ -2.16
CPSF6-207ENST00000551516 MFFQ9GZY8 342 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 DUSP21Q9H596 190 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 TUBA4BQ9H853 241 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 SLC25A22Q9H936 323 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 NDUFA4L2Q9NRX3 87 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 BET1LQ9NYM9 111 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF257Q9Y2Q1 563 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 RBMX2Q9Y388 322 aaKnown RBP1.58□□□□□ -2.16
CPSF6-207ENST00000551516 S4R3C0 116 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 TRBV7-1A0A0A6YYK4 115 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 TRAV2A0A0B4J234 112 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 LOC100130705A0A1B0GUX0 176 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 EFCAB10A6NFE3 127 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 M0R1X1 148 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 NDUFA4O00483 81 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 UPK2O00526 184 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 AGPAT2O15120 278 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 FABP7O15540 132 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 CRXO43186 299 aaPredicted RBP1.57□□□□□ -2.16
CPSF6-207ENST00000551516 RBFOX2O43251 390 aaKnown RBP eCLIP1.57□□□□□ -2.168e-10■□□□□ 10.6
CPSF6-207ENST00000551516 REG1AP05451 166 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 SERPINE2P07093 398 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 CTSDP07339 412 aaPredicted RBP1.57□□□□□ -2.16
CPSF6-207ENST00000551516 UBBP0CG47 229 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 ELK1P19419 428 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 HLA-DMBP28068 263 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 GNRHRP30968 328 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 TAS2R19P59542 299 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 LYZP61626 148 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 GNGT1P63211 74 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 FABP5Q01469 135 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 ST3GAL4Q11206 333 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 RCN1Q15293 331 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 MSMO1Q15800 293 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 RPEL1Q2QD12 228 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 ACSM3Q53FZ2 586 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 RNASEKQ6P5S7 137 aaKnown RBP1.57□□□□□ -2.16
CPSF6-207ENST00000551516 AMTNQ6UX39 209 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 CLEC19AQ6UXS0 136 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 SPATA24Q86W54 205 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 SPAG16Q8N0X2 631 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 C1orf158Q8N1D5 194 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 LYPD1Q8N2G4 141 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 NKAPP1Q8N9T2 125 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 OR1L6Q8NGR2 347 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 OR11H2Q8NH07 326 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 C7orf33Q8WU49 177 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 PYDC1Q8WXC3 89 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 ACOT12Q8WYK0 555 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 DGCR14Q96DF8 476 aaKnown RBP1.57□□□□□ -2.16
CPSF6-207ENST00000551516 OR2A7Q96R45 310 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 RARRES2Q99969 163 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 PRRG3Q9BZD7 231 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 FAM192AQ9GZU8 254 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 NXF2Q9GZY0 626 aaKnown RBP1.57□□□□□ -2.16
CPSF6-207ENST00000551516 FAM107BQ9H098 131 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 OR2D2Q9H210 308 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 OR51E2Q9H255 320 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 DCSTAMPQ9H295 470 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 RNF167Q9H6Y7 350 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 NEK6Q9HC98 313 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 C12orf4Q9NQ89 552 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 TMEM14BQ9NUH8 114 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 PRR34Q9NV39 138 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 ERGIC3Q9Y282 383 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 KIF25-AS1Q9Y6Z4 181 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 NACAE9PAV3 2078 aa1.57□□□□□ -2.16
CPSF6-207ENST00000551516 IGHV3OR16-8A0A075B7F1 116 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 IGHV7-4-1A0A0J9YVY3 117 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 TEX50A0A1B0GTY4 177 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 SMCO3A2RU48 225 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 IFITM5A6NNB3 132 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 KLLNB2CW77 178 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 C11orf94C9JXX5 98 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 H3BMM0 161 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 GNGT2O14610 69 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 CASQ2O14958 399 aaPredicted RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 GYG2O15488 501 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 TGOLN2O43493 480 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms