RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 COL16A1Q07092 1604 aaPredicted RBP4.71□□□□□ -1.66
R3HDM2-213ENST00000551465 LTBP1Q14766 1721 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 IGLV1-36A0A0B4J1U3 117 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 TRAV8-2A0A0B4J237 113 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 TRAV4A0A0B4J268 109 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 MYMXA0A1B0GTQ4 84 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 F5H697 171 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 NPYP01303 97 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 P04436 131 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 GCHFRP30047 84 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 SPINT3P49223 89 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 DSCR4P56555 118 aaPredicted RBP4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 FXYD4P59646 89 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 UBE2D3P61077 147 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 PPP1CAP62136 330 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 UBE2D2P62837 147 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 C1orf61Q13536 156 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 FHL3Q13643 280 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 CENPWQ5EE01 88 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 ACP7Q6ZNF0 438 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 AMN1Q8IY45 258 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 DCAF4L2Q8NA75 395 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 RNF138Q8WVD3 245 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 URB1-AS1Q96HZ7 61 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 CARD19Q96LW7 228 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 MGST2Q99735 147 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 SIRPDQ9H106 197 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 EDA2RQ9HAV5 297 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 FGF22Q9HCT0 170 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 FAM60AQ9NP50 221 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 TP53TG1Q9Y2A0 90 aa4.7□□□□□ -1.66
R3HDM2-213ENST00000551465 KIF26BQ2KJY2 2108 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 LOC102723996A0A087X1L8 192 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 TMED7-TICAM2A0A0A6YYA0 188 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 A0A0D9SEW6 157 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 MS4A18H0YCH9 400 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 ATOX1O00244 68 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 BCL3P20749 454 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 PSMB8P28062 276 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 CLDN2P57739 230 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 RPL18Q07020 188 aaKnown RBP4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 EBI3Q14213 229 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 TMEM170BQ5T4T1 132 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 C1orf195Q5TG92 126 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 HES3Q5TGS1 186 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 Q6ZSR3 168 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 SLC25A48Q6ZT89 311 aaKnown RBP4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 HMGN2P46Q86SG4 172 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 ABHD12Q8N2K0 398 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 TMEM86BQ8N661 226 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 FAM57AQ8TBR7 257 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 GATAD1Q8WUU5 269 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 IFI27L1Q96BM0 104 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 ZNF414Q96IQ9 312 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 RITA1Q96K30 269 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 JPT2Q9H910 190 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 FOXA2Q9Y261 457 aaPredicted RBP4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 TRIP12Q14669 1992 aaPredicted RBP4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 COL4A2P08572 1712 aa4.69□□□□□ -1.66
R3HDM2-213ENST00000551465 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 A8MZ25 164 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SPRY1O43609 319 aaPredicted RBP4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 LMX1BO60663 402 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 ACTL6BO94805 426 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 RPS18P62269 152 aaKnown RBP4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 MZT1Q08AG7 82 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 FAM53BQ14153 422 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 KISS1Q15726 138 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 IZUMO4Q1ZYL8 232 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SPANXN5Q5MJ07 72 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 MED12LQ86YW9 2145 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SFTPA2Q8IWL1 248 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SFTPA1Q8IWL2 248 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 WDR31Q8NA23 367 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 OVCA2Q8WZ82 227 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 DPH3Q96FX2 82 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 C9orf85Q96MD7 179 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SRSF8Q9BRL6 282 aaKnown RBP4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SLC25A39Q9BZJ4 359 aaPredicted RBP4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 SPRY4Q9C004 299 aa4.68□□□□□ -1.66
R3HDM2-213ENST00000551465 TRBV25-1A0A075B6N4 114 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 IGKV1D-8A0A087WSZ0 117 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 LINC00473A8K010 186 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 ZNF785A8K8V0 405 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 HSPB6O14558 160 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 CHEK1O14757 476 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 HBDP02042 147 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 ARL14EPLP0DKL9 152 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 TWIST1Q15672 202 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 CST6Q15828 149 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 ANXA2RQ3ZCQ2 193 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 FHL5Q5TD97 284 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 IL17RELQ6ZVW7 336 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 RNF44Q7L0R7 432 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 SCAMP5Q8TAC9 235 aa4.67□□□□□ -1.66
R3HDM2-213ENST00000551465 HDHD3Q9BSH5 251 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms