RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 WIPF3A6NGB9 483 aa9.33□□□□□ -0.92
VDR-206ENST00000549336 NPIPB6E9PJ23 425 aa9.33□□□□□ -0.92
VDR-206ENST00000549336 FCER1GP30273 86 aa9.33□□□□□ -0.92
VDR-206ENST00000549336 ASIPP42127 132 aa9.33□□□□□ -0.92
VDR-206ENST00000549336 SYNJ2BPP57105 145 aa9.33□□□□□ -0.92
VDR-206ENST00000549336 CENPWQ5EE01 88 aa9.33□□□□□ -0.92
VDR-206ENST00000549336 AURKAIP1Q9NWT8 199 aaPredicted RBP9.33□□□□□ -0.92
VDR-206ENST00000549336 YTHDF2Q9Y5A9 579 aaKnown RBP9.33□□□□□ -0.92
VDR-206ENST00000549336 LCN12Q6JVE5 192 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 MBD3L1Q8WWY6 194 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 TSSC4Q9Y5U2 329 aaPredicted RBP9.32□□□□□ -0.92
VDR-206ENST00000549336 OR11H12B2RN74 326 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 NDUFA4O00483 81 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 FAM53AQ6NSI3 398 aaPredicted RBP9.32□□□□□ -0.92
VDR-206ENST00000549336 LY6G5BQ8NDX9 201 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 TNFRSF13BO14836 293 aaPredicted RBP9.32□□□□□ -0.92
VDR-206ENST00000549336 CD5LO43866 347 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 STAG3L2P0CL84 134 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 HIVEP3Q5T1R4 2406 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 FASNP49327 2511 aaKnown RBP9.32□□□□□ -0.92
VDR-206ENST00000549336 FABP5P3A8MUU1 101 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 Q6AWC8 147 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 MGST2Q99735 147 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
VDR-206ENST00000549336 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
VDR-206ENST00000549336 LYL1P12980 280 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 C1orf194Q5T5A4 169 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 TRAV21A0A0B4J279 112 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 H7C1H1 209 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 EIF3GO75821 320 aaKnown RBP eCLIP9.31□□□□□ -0.92
VDR-206ENST00000549336 IGKV1-39P01597 117 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 IGKV1D-39P04432 117 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 FOXE3Q13461 319 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 Q8N7P7 452 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 LINC00469Q8N7U9 141 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 LINC00574Q9H8X3 128 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 H0Y8G0 127 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 ZFYVE26Q68DK2 2539 aa9.31□□□□□ -0.92
VDR-206ENST00000549336 WFDC11Q8NEX6 87 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 PKD1L2Q7Z442 2459 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 ZNF462Q96JM2 2506 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 CBY3A6NI87 242 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 PMS2P5A8MQ11 134 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 PYYP10082 97 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 CRISP2P16562 243 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 WT1-ASQ06250 92 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 PDE6HQ13956 83 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 RNASEKQ6P5S7 137 aaKnown RBP9.3□□□□□ -0.92
VDR-206ENST00000549336 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 RARRES2Q99969 163 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 DYSFO75923 2080 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 ARHGAP21Q5T5U3 1957 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 SRRM4A7MD48 611 aaKnown RBP9.3□□□□□ -0.92
VDR-206ENST00000549336 SEC14L6B5MCN3 397 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 IGHV4-31P0DP07 118 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 OR11H1Q8NG94 326 aa9.3□□□□□ -0.92
VDR-206ENST00000549336 ZNF253O75346 499 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 PPP1R17O96001 155 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 RPL15P61313 204 aaKnown RBP9.29□□□□□ -0.92
VDR-206ENST00000549336 ZNF841Q6ZN19 808 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 TRAV1-1A0A0B4J248 108 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 APCSP02743 223 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 IER3P46695 156 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 CCL20P78556 96 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 WFDC1Q9HC57 220 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 NRN1Q9NPD7 142 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 MRPL27Q9P0M9 148 aaKnown RBP9.29□□□□□ -0.92
VDR-206ENST00000549336 TMEM89A2RUT3 159 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 FAM3BP58499 235 aaPredicted RBP9.29□□□□□ -0.92
VDR-206ENST00000549336 MBD6Q96DN6 1003 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 SHANK2-AS3Q9BTD1 123 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
VDR-206ENST00000549336 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 CXorf65A6NEN9 183 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 C1QL4Q86Z23 238 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 RFNGQ9Y644 331 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 ZNF688P0C7X2 276 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 ARL2-SNX15V9GYD0 113 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 EIF4E3Q8N5X7 224 aaKnown RBP9.28□□□□□ -0.92
VDR-206ENST00000549336 RNASE4P34096 147 aaKnown RBP9.28□□□□□ -0.92
VDR-206ENST00000549336 C2CD4CQ8TF44 421 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 SFRP2Q96HF1 295 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 TNRC6BQ9UPQ9 1833 aaKnown RBP9.28□□□□□ -0.92
VDR-206ENST00000549336 LRRK2Q5S007 2527 aa9.28□□□□□ -0.92
VDR-206ENST00000549336 A0A1B0GW15 77 aa9.27□□□□□ -0.92
VDR-206ENST00000549336 AMBPP02760 352 aa9.27□□□□□ -0.92
VDR-206ENST00000549336 CKS2P33552 79 aa9.27□□□□□ -0.92
VDR-206ENST00000549336 ATP5G3P48201 142 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms