RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 HMGB3O15347 200 aaKnown RBP6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 NUPL2O15504 423 aaKnown RBP6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 TGOLN2O43493 480 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 MBP02144 154 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 RD3LP0DJH9 198 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 FGF8P55075 233 aaPredicted RBP6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 LYZP61626 148 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 CCL20P78556 96 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 USF2Q15853 346 aaPredicted RBP6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 LCN15Q6UWW0 184 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 C18orf65Q6ZTR6 163 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 MIR17HGQ75NE6 70 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 OR4X2Q8NGF9 303 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 OR51G1Q8NGK1 321 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 UHRF2Q96PU4 802 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 HRH4Q9H3N8 390 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 SEPSECSQ9HD40 501 aaKnown RBP6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 TRAV1-1A0A0B4J248 108 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 A0A0G2JLM5 398 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 ANKRD34BA5PLL1 514 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 MAP1LC3B2A6NCE7 125 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 BMPR1BO00238 502 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 OR2C1O95371 312 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 IL4P05112 153 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 ARL3P36405 182 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 FAM78BQ5VT40 261 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF600Q6ZNG1 722 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 SLC7A5P1Q8MH63 180 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 COMMD1Q8N668 190 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 OR5AU1Q8NGC0 362 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 OR1B1Q8NGR6 318 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 GATAD1Q8WUU5 269 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 SFT2D1Q8WV19 159 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 RNF125Q96EQ8 232 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF503Q96F45 646 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 FAM167A-AS1Q96KT0 104 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 OR5B12Q96R08 314 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 SCRT1Q9BWW7 348 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 ACTR3CQ9C0K3 210 aaPredicted RBP6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 MAP1LC3BQ9GZQ8 125 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 DNAJC4Q9NNZ3 241 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 MED9Q9NWA0 146 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 GAR1Q9NY12 217 aaKnown RBP6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 MRPL27Q9P0M9 148 aaKnown RBP6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 FUT9Q9Y231 359 aa6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 PUS1Q9Y606 427 aaKnown RBP eCLIP6.22□□□□□ -1.41
DEPDC4-207ENST00000549249 IGHV3OR16-8A0A075B7F1 116 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 TRAV5A0A0B4J249 113 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 A0A1W2PPV4 95 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 CLPSL1A2RUU4 121 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 H3BRN7 92 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 I3L521 148 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 COX7A2P2O60397 106 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 FABP1P07148 127 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 LGALS1P09382 135 aaKnown RBP6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 STAG3L2P0CL84 134 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 STAG3L3P0CL85 134 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 ARL14EPLP0DKL9 152 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 CD28P10747 220 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 ORM2P19652 201 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 PROK1P58294 105 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 RHOBP62745 196 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 TOMM20LQ6UXN7 152 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 COMMD7Q86VX2 200 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 OR1L4Q8NGR5 311 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 Q8WTZ3 238 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 UBE2E2Q96LR5 201 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 PFDN5Q99471 154 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 PBDC1Q9BVG4 233 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 SLC25A2Q9BXI2 301 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 MRPL32Q9BYC8 188 aaKnown RBP6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 TMPRSS5Q9H3S3 457 aa6.21□□□□□ -1.42
DEPDC4-207ENST00000549249 IGHV4OR15-8A0A075B7B6 117 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 A0A087WW49 117 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 HYPMO75409 117 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 HBE1P02100 147 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 C8orf88P0DMB2 117 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 KRTAP10-3P60369 221 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 SRSF3P84103 164 aaKnown RBP6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 RELQ04864 619 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 NDUFA5Q16718 116 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 LEMD1Q68G75 181 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 UNQ9165/PRO28630Q6UXU0 137 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 IL34Q6ZMJ4 242 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 LINC00305Q7Z4B0 112 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 OR4F5Q8NH21 305 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 RNF2Q99496 336 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 SHANK2-AS3Q9BTD1 123 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 C19orf24Q9BVV8 132 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 SLC25A39Q9BZJ4 359 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 PEF1Q9UBV8 284 aaKnown RBP6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 PFDN2Q9UHV9 154 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
DEPDC4-207ENST00000549249 NDUFA4O00483 81 aa6.19□□□□□ -1.42
DEPDC4-207ENST00000549249 MRPS12O15235 138 aaKnown RBP6.19□□□□□ -1.42
DEPDC4-207ENST00000549249 ZNF207O43670 478 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms