RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 TGOLN2O43493 480 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 MPDU1O75352 247 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 CST7O76096 145 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 CA2P00918 260 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 FAM157CP0CG43 387 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 AKR1C3P42330 323 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 RPL27AP46776 148 aaKnown RBP6.63□□□□□ -1.35
VPS29-203ENST00000546588 RAB5CP51148 216 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 SLC38A11Q08AI6 406 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 SPANXN5Q5MJ07 72 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 RUSC1-AS1Q66K80 236 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 BRD3OSQ6XYD6 125 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 NAV2Q8IVL1 2488 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 CIARTQ8N365 385 aaPredicted RBP6.63□□□□□ -1.35
VPS29-203ENST00000546588 TMEM116Q8NCL8 245 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 OR10P1Q8NGE3 313 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 OR1L6Q8NGR2 347 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 OR1P1Q8NH06 330 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 IL17DQ8TAD2 202 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 RBMXL1Q96E39 390 aaKnown RBP6.63□□□□□ -1.35
VPS29-203ENST00000546588 GNPNAT1Q96EK6 184 aaPredicted RBP6.63□□□□□ -1.35
VPS29-203ENST00000546588 CLCC1Q96S66 551 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 RSG1Q9BU20 258 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 WDR61Q9GZS3 305 aaKnown RBP6.63□□□□□ -1.35
VPS29-203ENST00000546588 HRH4Q9H3N8 390 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 FBXL15Q9H469 300 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 PITPNC1Q9UKF7 332 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 WDR83OSQ9Y284 106 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 MOB4Q9Y3A3 225 aa6.63□□□□□ -1.35
VPS29-203ENST00000546588 ZANQ9Y493 2812 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 POLQO75417 2590 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 IGHV7-81A0A0B4J1V7 117 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 OR11H12B2RN74 326 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 SEC14L6B5MCN3 397 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 DNASE2O00115 360 aaPredicted RBP6.62□□□□□ -1.35
VPS29-203ENST00000546588 NMBP08949 121 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 MYOD1P15172 320 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 IER3P46695 156 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 SULT1A2P50226 295 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 SEC61GP60059 68 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 ERHP84090 104 aaKnown RBP6.62□□□□□ -1.35
VPS29-203ENST00000546588 SERF2P84101 59 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 TMEM267Q0VDI3 215 aaPredicted RBP6.62□□□□□ -1.35
VPS29-203ENST00000546588 C10orf55Q5SWW7 151 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 ASPHD1Q5U4P2 390 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 DPPA3Q6W0C5 159 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 Q6YL49 198 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 PDZD9Q8IXQ8 264 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 TTC9CQ8N5M4 171 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 TMEM86BQ8N661 226 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 OR11H1Q8NG94 326 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 OR11H2Q8NH07 326 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 OR5R1Q8NH85 324 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 SGMS2Q8NHU3 365 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 MRAPQ8TCY5 172 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 C2CD4CQ8TF44 421 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 P2RX4Q99571 388 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 SRD5A3Q9H8P0 318 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 DKK2Q9UBU2 259 aa6.62□□□□□ -1.35
VPS29-203ENST00000546588 F11RQ9Y624 299 aaKnown RBP6.62□□□□□ -1.35
VPS29-203ENST00000546588 ABCA1O95477 2261 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 UMAD1C9J7I0 102 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 K7ERU9 68 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 FCN1O00602 326 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 TCF21O43680 179 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 IGF1P05019 195 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 EGR2P11161 476 aaPredicted RBP6.61□□□□□ -1.35
VPS29-203ENST00000546588 FOLR2P14207 255 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 ATP6V0CP27449 155 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 SUB1P53999 127 aaKnown RBP eCLIP6.61□□□□□ -1.355e-6■■■■■ 28.3
VPS29-203ENST00000546588 SELENOTP62341 195 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 CX3CL1P78423 397 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 NDPQ00604 133 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 TNXAQ16473 311 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 FAM120AOSQ5T036 256 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 TCF24Q7RTU0 167 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 ARPC1AQ92747 370 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 PTH2Q96A98 100 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 SPAG8Q99932 426 aaPredicted RBP6.61□□□□□ -1.35
VPS29-203ENST00000546588 SLC25A33Q9BSK2 321 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 ENY2Q9NPA8 101 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 UQCC1Q9NVA1 299 aa6.61□□□□□ -1.35
VPS29-203ENST00000546588 IGLV11-55A0A075B6I3 123 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 C20orf202A1L168 122 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 M0QXV9 152 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 SIVA1O15304 175 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 MT-CO2P00403 227 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 IGHG2P01859 326 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 HIST1H1BP16401 226 aaKnown RBP6.6□□□□□ -1.35
VPS29-203ENST00000546588 FCGR2BP31994 310 aaPredicted RBP6.6□□□□□ -1.35
VPS29-203ENST00000546588 CNN1P51911 297 aaKnown RBP6.6□□□□□ -1.35
VPS29-203ENST00000546588 MFAP2P55001 183 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 HES1Q14469 280 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 FXYD3Q14802 87 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 SPINK9Q5DT21 86 aa6.6□□□□□ -1.35
VPS29-203ENST00000546588 SAMD13Q5VXD3 122 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms