RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.27□□□□□ -1.73
NPIPB3-214ENST00000545358 EPG5Q9HCE0 2579 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 KMT2BQ9UMN6 2715 aaPredicted RBP4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 TRBV7-1A0A0A6YYK4 115 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 AP4M1O00189 453 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 NUPL2O15504 423 aaKnown RBP4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 NDUFB4O95168 129 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 MT-ND4LP03901 98 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 IL4P05112 153 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 OR10J4P0C629 311 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 MED14OSP0DP75 135 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 PYYP10082 97 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 FOLR2P14207 255 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 CD99P14209 185 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 NPPCP23582 126 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 RPL23P62829 140 aaKnown RBP4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 RHOGP84095 191 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 KIAA0141Q14154 515 aaPredicted RBP4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 ADIRFQ15847 76 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 C15orf32Q32M92 178 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF491Q8N8L2 437 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 OR5T1Q8NG75 326 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF502Q8TBZ5 544 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 Q8WTZ3 238 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 EEF1AKMT3Q96AZ1 226 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 ANAPC16Q96DE5 110 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 FOXC2Q99958 501 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 FAM208BQ5VWN6 2430 aa4.26□□□□□ -1.73
NPIPB3-214ENST00000545358 TRAV5A0A0B4J249 113 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 MDFIC2A0A1B0GVS7 189 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 OR2T8A6NH00 312 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 COLCA2A8K830 154 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 G3V318 75 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 CLDN34H7C241 214 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 BMPR1BO00238 502 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 PPP1R2P9O14990 202 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 NBEAP1P0C6P0 100 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 HIST1H1EP10412 219 aaKnown RBP4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 MYCNOSP40205 109 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 AKR1C3P42330 323 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 RPL35P42766 123 aaKnown RBP4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 RAB9AP51151 201 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 CNN1P51911 297 aaKnown RBP4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 RELQ04864 619 aaPredicted RBP4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 PDE6HQ13956 83 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 LY6EQ16553 131 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 DEFB112Q30KQ8 113 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 RNF212Q495C1 297 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 FAM209BQ5JX69 171 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF343Q6P1L6 599 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 LINC01551Q86U37 167 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 BPIFA4PQ86YQ2 179 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 MAPK1IP1LQ8NDC0 245 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 OR4F17Q8NGA8 305 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 C2CD4CQ8TF44 421 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 HIST1H2BAQ96A08 127 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 ISOC2Q96AB3 205 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 USMG5Q96IX5 58 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 CCDC140Q96MF4 163 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 YPEL4Q96NS1 127 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 DERL1Q9BUN8 251 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 PRDM13Q9H4Q3 707 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 CDC42EP3Q9UKI2 254 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 VPREB3Q9UKI3 123 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 MYO18BQ8IUG5 2567 aa4.25□□□□□ -1.73
NPIPB3-214ENST00000545358 TRBV20OR9-2A0A075B6H5 130 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 TMEM89A2RUT3 159 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 SH2D7A6NKC9 451 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 LINC01548A6NM66 108 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 H7BYZ3 331 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 PEX7O00628 323 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 TGOLN2O43493 480 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 IGHV4-59P01825 116 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 TRGV3P03979 118 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 S100A9P06702 114 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 CTSGP08311 255 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 IGLC2P0DOY2 106 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 RPL7P18124 248 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 ATF4P18848 351 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 S100PP25815 95 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 CRYBB3P26998 211 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 GPR183P32249 361 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 IER3P46695 156 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 GNG4P50150 75 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 TAS2R60P59551 318 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 SUMO1P63165 101 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 CFHR3Q02985 330 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 ATP5G2Q06055 141 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 USF2Q15853 346 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 ZNF124Q15973 351 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 C9orf152Q5JTZ5 239 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 Q6YL49 198 aa4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-214ENST00000545358 LYPD1Q8N2G4 141 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms