RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 C21orf62Q9NYP8 219 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 COL12A1Q99715 3063 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
LDB3-207ENST00000542786 ASH1LQ9NR48 2969 aaKnown RBP11.09□□□□□ -0.63
LDB3-207ENST00000542786 ATP6V0E1O15342 81 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 CNN1P51911 297 aaKnown RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 BCL6BQ8N143 479 aaPredicted RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 BTF3L4Q96K17 158 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 UBR5O95071 2799 aaPredicted RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 TRAV34A0A0B4J273 112 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 PGPA6NDG6 321 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 OR2J3O76001 311 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 AMY1AP04745 511 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 IGLC2P0DOY2 106 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 HIST1H1EP10412 219 aaKnown RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 USF2Q15853 346 aaPredicted RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 COA6Q5JTJ3 125 aaKnown RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 C5orf17Q8NAS9 161 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
LDB3-207ENST00000542786 MEGF9Q9H1U4 602 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 Q9H3A6 140 aa11.08□□□□□ -0.64
LDB3-207ENST00000542786 A0A096LNT2 108 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 TRBV9A0A0B4J1U6 114 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 H3BTX0 84 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 GNG7O60262 68 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
LDB3-207ENST00000542786 ERVFC1-1P60608 527 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 VN1R17PQ8TDU5 208 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 C12orf57Q99622 126 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
LDB3-207ENST00000542786 TRAV40A0A0B4J280 105 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 IL4P05112 153 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 CTSGP08311 255 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 SMIM6P0DI80 62 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 IGHV4-38-2P0DP08 117 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
LDB3-207ENST00000542786 ADMP35318 185 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 MBD6Q96DN6 1003 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 TXN2Q99757 166 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 SPG11Q96JI7 2443 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 SH2D7A6NKC9 451 aaPredicted RBP11.06□□□□□ -0.64
LDB3-207ENST00000542786 MSMBP08118 114 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 CRIP2P52943 208 aaPredicted RBP11.06□□□□□ -0.64
LDB3-207ENST00000542786 BRD3OSQ6XYD6 125 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 BAGE2Q86Y30 109 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 ATG101Q9BSB4 218 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 THYN1Q9P016 225 aa11.06□□□□□ -0.64
LDB3-207ENST00000542786 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 TCRAP04437 139 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 DSCR9P59020 149 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 RPEL1Q2QD12 228 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 Q56UQ5 140 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 UNQ5815/PRO19632Q6UWF5 114 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 TMEM190Q8WZ59 177 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 CHRDL1Q9BU40 450 aa11.05□□□□□ -0.64
LDB3-207ENST00000542786 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
LDB3-207ENST00000542786 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 IGHV3-23P01764 117 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 TMEM219Q86XT9 240 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 PITPNC1Q9UKF7 332 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 MOB4Q9Y3A3 225 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 G3V318 75 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 LTAP01374 205 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 IGLV2-11P01706 119 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 MGST1P10620 155 aaKnown RBP11.04□□□□□ -0.64
LDB3-207ENST00000542786 ECSCRQ19T08 205 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 BPIFA4PQ86YQ2 179 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
LDB3-207ENST00000542786 OR2T8A6NH00 312 aa11.03□□□□□ -0.64
LDB3-207ENST00000542786 S100A9P06702 114 aaKnown RBP11.03□□□□□ -0.64
LDB3-207ENST00000542786 RHOGP84095 191 aa11.03□□□□□ -0.64
LDB3-207ENST00000542786 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
LDB3-207ENST00000542786 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
LDB3-207ENST00000542786 FMC1Q96HJ9 113 aa11.03□□□□□ -0.64
LDB3-207ENST00000542786 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
LDB3-207ENST00000542786 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 AVPP01185 164 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 COX6B1P14854 86 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 C15orf32Q32M92 178 aa11.02□□□□□ -0.64
LDB3-207ENST00000542786 EXOC3-AS1Q8N2X6 119 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms