RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 MZT1Q08AG7 82 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 DYNLRB1Q9NP97 96 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 IDI2-AS1Q9NZ38 188 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 SRRM4A7MD48 611 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 TAX1BP3O14907 124 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 ESDP10768 282 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 RAB1CQ92928 201 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 TRAV8-6A0A0B4J262 113 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 FAM181BA6NEQ2 426 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 C17orf58Q2M2W7 97 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 TIGITQ495A1 244 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 ZNF672Q499Z4 452 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 TEP1Q99973 2627 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 TRAV9-2A0A087WT02 112 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 IGHV3-21A0A0B4J1V1 117 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 PSG9Q00887 426 aa11.56□□□□□ -0.56
SFSWAP-210ENST00000541286 KBTBD11-OT1A0A1B0GTJ5 212 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 CORTO00230 105 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 C10orf55Q5SWW7 151 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 MBNL2Q5VZF2 373 aaKnown RBP11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 SSX8Q7RTT4 187 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 OR2D3Q8NGH3 330 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 C18orf32Q8TCD1 76 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 GNB1LQ9BYB4 327 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 ZNF331Q9NQX6 463 aaPredicted RBP11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 TANC2Q9HCD6 1990 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 TRAV30A0A087WSZ9 112 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 IGHV1-69-2A0A0G2JMI3 117 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 PPIAL4DF5H284 164 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 REG1AP05451 166 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 CCL3L1P16619 93 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 NGBQ9NPG2 151 aa11.55□□□□□ -0.56
SFSWAP-210ENST00000541286 IGLV3-9A0A075B6K5 115 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 IGKV1OR2-108A0A075B7D4 117 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 OR4C46A6NHA9 309 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 IBA57Q5T440 356 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 COMMD5Q9GZQ3 224 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 RNF7Q9UBF6 113 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 AKAP9Q99996 3911 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 ZNF207O43670 478 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 APOA2P02652 100 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 ZNF137PP52743 207 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 DLX1P56177 255 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 FAM169BQ8N8A8 192 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 OTOGQ6ZRI0 2925 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 IGHV3-72A0A0B4J1Y9 119 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 H3BTX0 84 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 CSN3P07498 182 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 CX3CL1P78423 397 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 GDF5OSQ5U4N7 250 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 TMEM116Q8NCL8 245 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 RAB37Q96AX2 223 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 HARBI1Q96MB7 349 aa11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 GSX1Q9H4S2 264 aaPredicted RBP11.54□□□□□ -0.56
SFSWAP-210ENST00000541286 PYYP10082 97 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 UBE2G1P62253 170 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 UBE2L3P68036 154 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 RTL8BQ17RB0 113 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 MORN5Q5VZ52 161 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 MXRA5Q9NR99 2828 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 FBLL1A6NHQ2 334 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 ENSAO43768 121 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 SAA1P0DJI8 122 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 APOBEC3AP31941 199 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 OR52E5Q8NH55 327 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 ABCA2Q9BZC7 2435 aa11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 RAI1Q7Z5J4 1906 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-210ENST00000541286 F2RL2O00254 374 aa11.52□□□□□ -0.56
SFSWAP-210ENST00000541286 TOX4O94842 621 aa11.52□□□□□ -0.56
SFSWAP-210ENST00000541286 NUP37Q8NFH4 326 aa11.52□□□□□ -0.56
SFSWAP-210ENST00000541286 BLNKQ8WV28 456 aa11.52□□□□□ -0.56
SFSWAP-210ENST00000541286 CHRDL1Q9BU40 450 aa11.52□□□□□ -0.56
SFSWAP-210ENST00000541286 C17orf100A8MU93 164 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 OR8B3Q8NGG8 313 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 GGTLC3B5MD39 225 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 GNG7O60262 68 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 LINC00869P0C866 280 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 CT45A6P0DMU7 189 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 CT45A5P0DMU8 189 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 CT45A7P0DMV0 189 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 KIR2DS2P43631 304 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 SSBP2P81877 361 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 DDB2Q92466 427 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 HILPDAQ9Y5L2 63 aa11.52□□□□□ -0.57
SFSWAP-210ENST00000541286 TEX50A0A1B0GTY4 177 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 MAPK1IP1LQ8NDC0 245 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 SAP30LQ9HAJ7 183 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 PRNDQ9UKY0 176 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 SETD2Q9BYW2 2564 aaPredicted RBP11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 AMY1AP04745 511 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 TNFRSF19Q9NS68 423 aa11.51□□□□□ -0.57
SFSWAP-210ENST00000541286 PPBPP02775 128 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms