RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 C16orf90A8MZG2 172 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 IFNA4P05014 189 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF728P0DKX0 622 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 GZMBP10144 247 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 CRYGSP22914 178 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 QRFPP83859 136 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
PRKDC-209ENST00000540819 EIF5AL1Q6IS14 154 aaKnown RBP3.37□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF880Q6PDB4 577 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 LYG1Q8N1E2 194 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 OR5D16Q8NGK9 328 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 PPP3R2Q96LZ3 170 aa3.37□□□□□ -1.87
PRKDC-209ENST00000540819 NCKAP5O14513 1909 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 LCTP09848 1927 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 GREB1Q4ZG55 1949 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 KDM6AO15550 1401 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-209ENST00000540819 GRIN2AQ12879 1464 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 MDFIC2A0A1B0GVS7 189 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 C7orf71A4D174 169 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 H3BPC8 53 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 CORTO00230 105 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF19P17023 458 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF660Q6AZW8 331 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF714Q96N38 554 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 IMMP2LQ96T52 175 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 MARCOQ9UEW3 520 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-209ENST00000540819 S4R3C0 116 aa3.36□□□□□ -1.87
PRKDC-209ENST00000540819 MYH9P35579 1960 aaKnown RBP3.36□□□□□ -1.87
PRKDC-209ENST00000540819 ARHGEF28Q8N1W1 1705 aaKnown RBP3.36□□□□□ -1.87
PRKDC-209ENST00000540819 TRPM1Q7Z4N2 1603 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 C20orf202A1L168 122 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 A8MWV9 139 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 H3BT86 120 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 COL8A2P25067 703 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
PRKDC-209ENST00000540819 EIF2B2P49770 351 aaKnown RBP3.35□□□□□ -1.87
PRKDC-209ENST00000540819 NDPQ00604 133 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 HSD17B12Q53GQ0 312 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 TCTEX1D1Q8N7M0 179 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 OR4E2Q8NGC2 313 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 OR10AC1Q8NH08 325 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 MCEEQ96PE7 176 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 BANF2Q9H503 90 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 TXNL4BQ9NX01 149 aaKnown RBP3.35□□□□□ -1.87
PRKDC-209ENST00000540819 MYO10Q9HD67 2058 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 ARHGAP31Q2M1Z3 1444 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 YEATS2Q9ULM3 1422 aa3.35□□□□□ -1.87
PRKDC-209ENST00000540819 SCN8AQ9UQD0 1980 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 RIMBP3CA6NJZ7 1639 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 RIMBP3BA6NNM3 1639 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 RIMBP3Q9UFD9 1639 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 A0A0D9SG52 128 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 OR2T8A6NH00 312 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF727A8MUV8 499 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF670-ZNF695F2Z2N8 137 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 K7EM74 188 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 K7ERJ3 54 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 WISP3O95389 354 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-209ENST00000540819 APODP05090 189 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 MUC1P15941 1255 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-209ENST00000540819 GUCA1AP43080 201 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-209ENST00000540819 KRTAP10-3P60369 221 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 SUPT4H1P63272 117 aaKnown RBP3.34□□□□□ -1.87
PRKDC-209ENST00000540819 HES1Q14469 280 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 ZNF181Q2M3W8 571 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 KHDC3LQ587J8 217 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 GLIPR1L1Q6UWM5 242 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 C1orf64Q8NEQ6 169 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 OR5H6Q8NGV6 325 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 PRELID3AQ96N28 172 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 TMEM191AQ9H0A3 160 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 FAM215AQ9Y5M1 114 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 SMAD5-AS1Q9Y6J3 95 aa3.34□□□□□ -1.87
PRKDC-209ENST00000540819 TP53BP1Q12888 1972 aaPredicted RBP3.34□□□□□ -1.88
PRKDC-209ENST00000540819 NAIPQ13075 1403 aa3.34□□□□□ -1.88
PRKDC-209ENST00000540819 KDM5CP41229 1560 aa3.34□□□□□ -1.88
PRKDC-209ENST00000540819 SBF1O95248 1867 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 MYH6P13533 1939 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 IGHV3OR16-8A0A075B7F1 116 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 A0A1B0GU33 70 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 C7orf66A4D0T2 115 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 DNAH10OSP0CZ25 163 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 FUSP35637 526 aaKnown RBP eCLIP3.33□□□□□ -1.88
PRKDC-209ENST00000540819 AKR1D1P51857 326 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 FOXA3P55318 350 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-209ENST00000540819 TMEM155Q4W5P6 130 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 DPPA3Q6W0C5 159 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 C7orf65Q6ZTY9 151 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 C3orf56Q8N813 242 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 Q8NAQ8 132 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 MORN4Q8NDC4 146 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 Q8NDZ9 215 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 FGF13Q92913 245 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-209ENST00000540819 SOX21Q9Y651 276 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-209ENST00000540819 POLEQ07864 2286 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 ERBINQ96RT1 1412 aa3.33□□□□□ -1.88
PRKDC-209ENST00000540819 TRPM6Q9BX84 2022 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 TRGV5A0A0B4J1U4 118 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms