RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 C5orf17Q8NAS9 161 aa16.53■□□□□ 0.24
LSM14A-202ENST00000540746 MLST8Q9BVC4 326 aa16.53■□□□□ 0.24
LSM14A-202ENST00000540746 S4R3C0 116 aa16.53■□□□□ 0.24
LSM14A-202ENST00000540746 CD33P20138 364 aa16.53■□□□□ 0.24
LSM14A-202ENST00000540746 GPR6P46095 362 aaPredicted RBP16.53■□□□□ 0.24
LSM14A-202ENST00000540746 MS4A10Q96PG2 267 aa16.53■□□□□ 0.24
LSM14A-202ENST00000540746 TCRAP04437 139 aa16.52■□□□□ 0.24
LSM14A-202ENST00000540746 RPL19P84098 196 aaKnown RBP16.52■□□□□ 0.24
LSM14A-202ENST00000540746 NDPQ00604 133 aa16.52■□□□□ 0.24
LSM14A-202ENST00000540746 LINC00322Q6ZN03 302 aaPredicted RBP16.52■□□□□ 0.24
LSM14A-202ENST00000540746 C1orf122Q6ZSJ8 110 aa16.52■□□□□ 0.24
LSM14A-202ENST00000540746 GPR82Q96P67 336 aa16.52■□□□□ 0.24
LSM14A-202ENST00000540746 HOXB4P17483 251 aaPredicted RBP16.51■□□□□ 0.23
LSM14A-202ENST00000540746 DEFA6Q01524 100 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 BAGE3Q86Y29 109 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 NUP35Q8NFH5 326 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 GRAMD2BQ96HH9 432 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 C14orf144Q96I85 54 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 RBM14Q96PK6 669 aaKnown RBP16.51■□□□□ 0.23
LSM14A-202ENST00000540746 TMEM14CQ9P0S9 112 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 A6NNC1 897 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 BMPR1BO00238 502 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 FANCD2OSQ96PS1 177 aa16.51■□□□□ 0.23
LSM14A-202ENST00000540746 VWC2LB2RUY7 222 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 TOMM40O96008 361 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 LTAP01374 205 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 COX19Q49B96 90 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 Q6ZWC4 215 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 SPTAN1Q13813 2472 aaKnown RBP16.5■□□□□ 0.23
LSM14A-202ENST00000540746 PKD1L2Q7Z442 2459 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 HLA-DQA1P01909 254 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 HIST1H1EP10412 219 aaKnown RBP16.5■□□□□ 0.23
LSM14A-202ENST00000540746 IQCJQ1A5X6 159 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 GDF5OSQ5U4N7 250 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 EXOC3-AS1Q8N2X6 119 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 Q8N6K4 173 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 KIR3DL3Q8N743 410 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 ZNF491Q8N8L2 437 aa16.5■□□□□ 0.23
LSM14A-202ENST00000540746 SCGB1D1O95968 90 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 UQCRFS1P47985 274 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 SLAQ13239 276 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 ZNF562Q6V9R5 426 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 Q71RC1 249 aaPredicted RBP16.49■□□□□ 0.23
LSM14A-202ENST00000540746 SMIM12Q96EX1 92 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 FMC1Q96HJ9 113 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 NEU1Q99519 415 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 SIRPDQ9H106 197 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 PRORYQ9H606 182 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 UBTD1Q9HAC8 227 aa16.49■□□□□ 0.23
LSM14A-202ENST00000540746 CACNA1BQ00975 2339 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 TRAV8-1A0A0A6YYK1 113 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 TPPP2P59282 170 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 USF2Q15853 346 aaPredicted RBP16.48■□□□□ 0.23
LSM14A-202ENST00000540746 BCL6BQ8N143 479 aaPredicted RBP16.48■□□□□ 0.23
LSM14A-202ENST00000540746 TSKUQ8WUA8 353 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 C17orf77Q96MU5 243 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 RCHY1Q96PM5 261 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 SHANK2-AS3Q9BTD1 123 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 IGLV11-55A0A075B6I3 123 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
LSM14A-202ENST00000540746 A8MWP6 167 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 SRIP30626 198 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 PAFAH1B2P68402 229 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 WIPF2Q8TF74 440 aaPredicted RBP16.48■□□□□ 0.23
LSM14A-202ENST00000540746 ARPC1AQ92747 370 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 TMEM68Q96MH6 324 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 OTORQ9NRC9 128 aa16.48■□□□□ 0.23
LSM14A-202ENST00000540746 HIGD1CA8MV81 97 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 H3BRN7 92 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 CCDC144NLQ6NUI1 221 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 ITLN2Q8WWU7 325 aaPredicted RBP16.47■□□□□ 0.23
LSM14A-202ENST00000540746 RNF125Q96EQ8 232 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 ZNF331Q9NQX6 463 aaPredicted RBP16.47■□□□□ 0.23
LSM14A-202ENST00000540746 VPS13CQ709C8 3753 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 CFAP46Q8IYW2 2715 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 NPIPB5A8MRT5 1133 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 F8W735 103 aaPredicted RBP16.47■□□□□ 0.23
LSM14A-202ENST00000540746 C19orf84I3L1E1 186 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 TOX4O94842 621 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 IGLV2-11P01706 119 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 PRSS22Q9GZN4 317 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 NAGKQ9UJ70 344 aa16.47■□□□□ 0.23
LSM14A-202ENST00000540746 APCSP02743 223 aa16.46■□□□□ 0.23
LSM14A-202ENST00000540746 IL4P05112 153 aa16.46■□□□□ 0.23
LSM14A-202ENST00000540746 EBI3Q14213 229 aa16.46■□□□□ 0.23
LSM14A-202ENST00000540746 OR10J3Q5JRS4 329 aa16.46■□□□□ 0.23
LSM14A-202ENST00000540746 HSPB9Q9BQS6 159 aa16.46■□□□□ 0.23
LSM14A-202ENST00000540746 C19orf71A6NCJ1 209 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 IGLC2P0DOY2 106 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 MINOS1Q5TGZ0 78 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 MINOS1-NBL1R4GNA1 71 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 TRBV19A0A075B6N1 114 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 WI2-2373I1.2A0A1W2PRP0 233 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 RASL11AQ6T310 242 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 Q86TA4 180 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 TTC9CQ8N5M4 171 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 AJUBAQ96IF1 538 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 CHRDL1Q9BU40 450 aa16.45■□□□□ 0.22
LSM14A-202ENST00000540746 POLR3KQ9Y2Y1 108 aaPredicted RBP16.45■□□□□ 0.22
LSM14A-202ENST00000540746 ZFHX3Q15911 3703 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms