RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 DYNAPQ8N1N2 210 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 OR5B17Q8NGF7 314 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 CNBD2Q96M20 576 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 Q96M85 177 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 FUT9Q9Y231 359 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 A0A1B0GUL6 1792 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 NOTCH1P46531 2555 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 ECM29Q5VYK3 1845 aa2.17□□□□□ -2.06
TRAV11-201ENST00000539512 MPDZO75970 2070 aa2.16□□□□□ -2.06
TRAV11-201ENST00000539512 GGT3PA6NGU5 568 aa2.16□□□□□ -2.06
TRAV11-201ENST00000539512 RPSAP08865 295 aaKnown RBP2.16□□□□□ -2.06
TRAV11-201ENST00000539512 NFYAP23511 347 aaPredicted RBP2.16□□□□□ -2.06
TRAV11-201ENST00000539512 HLA-DMBP28068 263 aa2.16□□□□□ -2.06
TRAV11-201ENST00000539512 PARD6GQ9BYG4 376 aaPredicted RBP2.16□□□□□ -2.06
TRAV11-201ENST00000539512 SOX21Q9Y651 276 aaPredicted RBP2.16□□□□□ -2.06
TRAV11-201ENST00000539512 URB1O60287 2271 aaKnown RBP2.16□□□□□ -2.06
TRAV11-201ENST00000539512 ACACAQ13085 2346 aa2.16□□□□□ -2.06
TRAV11-201ENST00000539512 FN1P02751 2386 aaKnown RBP2.15□□□□□ -2.06
TRAV11-201ENST00000539512 JMJD1CQ15652 2540 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 CALB1P05937 261 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 HLA-EP13747 358 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 GRK1Q15835 563 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 HIST2H3PS2Q5TEC6 136 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 FP248Q71RG6 208 aaPredicted RBP2.15□□□□□ -2.07
TRAV11-201ENST00000539512 DEFB125Q8N687 156 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 GPR32P1Q8NGA4 272 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 HSPB9Q9BQS6 159 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 CYSTM1Q9H1C7 97 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 DOCK1Q14185 1865 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 SIPA1L3O60292 1781 aaPredicted RBP2.15□□□□□ -2.07
TRAV11-201ENST00000539512 PTPRSQ13332 1948 aa2.15□□□□□ -2.07
TRAV11-201ENST00000539512 ATG2BQ96BY7 2078 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 CACNA1EQ15878 2313 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 TET1Q8NFU7 2136 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 IGKV2-40A0A087WW87 121 aaPredicted RBP2.14□□□□□ -2.07
TRAV11-201ENST00000539512 AHSA1O95433 338 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 IGKV2D-40P01614 121 aaPredicted RBP2.14□□□□□ -2.07
TRAV11-201ENST00000539512 TNNC2P02585 160 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 CTAG1AP78358 180 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 MRPS15P82914 257 aaKnown RBP2.14□□□□□ -2.07
TRAV11-201ENST00000539512 RPL18Q07020 188 aaKnown RBP2.14□□□□□ -2.07
TRAV11-201ENST00000539512 ARHGAP11BQ3KRB8 267 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 DCXRQ7Z4W1 244 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 OR8J2Q8NGG1 315 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 UCK1Q9HA47 277 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 Q9Y3F1 56 aa2.14□□□□□ -2.07
TRAV11-201ENST00000539512 PTPRFP10586 1907 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 CCDC168Q8NDH2 2452 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 SDK1Q7Z5N4 2213 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 PKD1L1Q8TDX9 2849 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 IRGMA1A4Y4 181 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 OR51F1A6NGY5 319 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 SDCBPO00560 298 aaPredicted RBP2.13□□□□□ -2.07
TRAV11-201ENST00000539512 C1QAP02745 245 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 FGF6P10767 208 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 CD52P31358 61 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 EVX1P49640 407 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 EIF2B2P49770 351 aaKnown RBP2.13□□□□□ -2.07
TRAV11-201ENST00000539512 MOGQ16653 247 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 FAM27BQ5VT28 67 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 PTH2Q96A98 100 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 PPP1R14BQ96C90 147 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 OR51I1Q9H343 314 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 HIVEP3Q5T1R4 2406 aa2.13□□□□□ -2.07
TRAV11-201ENST00000539512 SPEF2Q9C093 1822 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 ZNF236Q9UL36 1845 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 TRBV20OR9-2A0A075B6H5 130 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 IGKV3D-7A0A0C4DH55 119 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 IGKV3OR2-268A0A0C4DH90 116 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 TRBV10-2A0A0K0K1G8 114 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 KCNK1O00180 336 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 IGHV3-7P01780 117 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 METTL15P1P0C7V9 234 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 NEFHP12036 1026 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 RAB5BP61020 215 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 FAM173BQ6P4H8 233 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 OR51D1Q8NGF3 324 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 OR8B3Q8NGG8 313 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 C10orf105Q8TEF2 133 aa2.12□□□□□ -2.07
TRAV11-201ENST00000539512 AKAP9Q99996 3911 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 AHCTF1Q8WYP5 2266 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 RP1L1Q8IWN7 2480 aaPredicted RBP2.11□□□□□ -2.07
TRAV11-201ENST00000539512 SMIM23A6NLE4 172 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 TGOLN2O43493 480 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 UBBP0CG47 229 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 LYNX1P0DP58 116 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 FXYD2P54710 66 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 MCFD2Q8NI22 146 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 OR8D2Q9GZM6 311 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 EFCAB1Q9HAE3 211 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 IL36BQ9NZH7 164 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 GINS2Q9Y248 185 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 DOCK2Q92608 1830 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 SPTBN1Q01082 2364 aaKnown RBP2.11□□□□□ -2.07
TRAV11-201ENST00000539512 FANCMQ8IYD8 2048 aa2.11□□□□□ -2.07
TRAV11-201ENST00000539512 COL6A6A6NMZ7 2263 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 TANC1Q9C0D5 1861 aa2.1□□□□□ -2.07
TRAV11-201ENST00000539512 TRAPPC13A5PLN9 417 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms