RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TMEM229BQ8NBD8 167 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 OR4D11Q8NGI4 311 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 SCAF11Q99590 1463 aaKnown RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 TCEAL2Q9H3H9 227 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 CACYBPQ9HB71 228 aaKnown RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 BCL2L10Q9HD36 194 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 NHP2Q9NX24 153 aaKnown RBP1.53□□□□□ -2.16
SNHG1-210ENST00000539303 SPANXCQ9NY87 97 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 RASL12Q9NYN1 266 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 RIMBP3Q9UFD9 1639 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 RNF11Q9Y3C5 154 aa1.53□□□□□ -2.16
SNHG1-210ENST00000539303 XIRP1Q702N8 1843 aaKnown RBP1.52□□□□□ -2.17
SNHG1-210ENST00000539303 ADGBQ8N7X0 1667 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 KDM5BQ9UGL1 1544 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 BCL9O00512 1426 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 IGKV1D-42A0A075B6H8 117 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 TRAV36DV7A0A075B6V5 113 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 A0A087WX48 190 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 IGKV3D-11A0A0A0MRZ8 115 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 BORCS7-ASMTA0A0B4J1R7 106 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 ARRDC5A6NEK1 342 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 K7ERJ3 54 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 NAPSAO96009 420 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 MGST1P10620 155 aaKnown RBP1.52□□□□□ -2.17
SNHG1-210ENST00000539303 CMPK1P30085 196 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 SDC2P34741 201 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 NDUFA6P56556 154 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 CKS1BP61024 79 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 RPS28P62857 69 aaKnown RBP1.52□□□□□ -2.17
SNHG1-210ENST00000539303 HBBP68871 147 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 HES1Q14469 280 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 SS18Q15532 418 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 Q6ZTI0 123 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 C3orf56Q8N813 242 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 OR4K15Q8NH41 348 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 OR2H1Q9GZK4 316 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 PRO2289Q9P1D8 64 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 HS3ST2Q9Y278 367 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 MPDZO75970 2070 aa1.52□□□□□ -2.17
SNHG1-210ENST00000539303 MYO5AQ9Y4I1 1855 aaKnown RBP1.52□□□□□ -2.17
SNHG1-210ENST00000539303 ARHGEF28Q8N1W1 1705 aaKnown RBP1.52□□□□□ -2.17
SNHG1-210ENST00000539303 CEP164Q9UPV0 1460 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 TRAV3A0A0B4J244 114 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 A0A0G2JQZ4 141 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 M0QZK8 103 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 HIST1H2BKO60814 126 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 TIMM17BO60830 172 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 IGKV4-1P06312 121 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 HIST1H2BJP06899 126 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 CTSDP07339 412 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-210ENST00000539303 UBBP0CG47 229 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 ZNF705BP0CI00 300 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-210ENST00000539303 PSPHP78330 225 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 TAF9Q16594 264 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 ESRGQ1W209 222 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 CCDC58Q4VC31 144 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 TMEM155Q4W5P6 130 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 C4orf22Q6V702 233 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 OR8I2Q8N0Y5 310 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 LXNQ9BS40 222 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 TIMM21Q9BVV7 248 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 KRTAP4-3Q9BYR4 195 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 TAS2R4Q9NYW5 299 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 NUP98P52948 1817 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 CEP152O94986 1710 aa1.51□□□□□ -2.17
SNHG1-210ENST00000539303 NCKAP5O14513 1909 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 ANAPC1Q9H1A4 1944 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 ANKRD31Q8N7Z5 1873 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TAF1LQ8IZX4 1826 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TRAV1-1A0A0B4J248 108 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TRAV5A0A0B4J249 113 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TRGV4A0A0C4DH28 118 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 IGHV1-58A0A0C4DH39 117 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 A0A1B0GX51 115 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TMEM189A5PLL7 270 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 ZNF705FA8MVS1 300 aaPredicted RBP1.5□□□□□ -2.17
SNHG1-210ENST00000539303 A8MWV9 139 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 IBA57-AS1B1ANH7 110 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 RER1O15258 196 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 IFNA4P05014 189 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 DBIP07108 87 aaKnown RBP1.5□□□□□ -2.17
SNHG1-210ENST00000539303 AKR1C3P42330 323 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 RPL35P42766 123 aaKnown RBP1.5□□□□□ -2.17
SNHG1-210ENST00000539303 RNASE10Q5GAN6 216 aaKnown RBP1.5□□□□□ -2.17
SNHG1-210ENST00000539303 SPANXN5Q5MJ07 72 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 HCP5Q6MZN7 132 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 LINC00305Q7Z4B0 112 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TEX29Q8N6K0 151 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 OR5D16Q8NGK9 328 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 ZNF418Q8TF45 676 aaPredicted RBP1.5□□□□□ -2.17
SNHG1-210ENST00000539303 TCEAL4Q96EI5 215 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 NOTCH2Q04721 2471 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 CCDC88CQ9P219 2028 aa1.5□□□□□ -2.17
SNHG1-210ENST00000539303 MYO9BQ13459 2157 aa1.49□□□□□ -2.17
SNHG1-210ENST00000539303 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
SNHG1-210ENST00000539303 IGLV3-9A0A075B6K5 115 aa1.49□□□□□ -2.17
SNHG1-210ENST00000539303 H3BRN7 92 aa1.49□□□□□ -2.17
SNHG1-210ENST00000539303 ZNF737O75373 536 aa1.49□□□□□ -2.17
SNHG1-210ENST00000539303 TNFSF15O95150 251 aa1.49□□□□□ -2.17
SNHG1-210ENST00000539303 MT-ND6P03923 174 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms