RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 CXCL1P09341 107 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 AKR1C4P17516 323 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 FAM3BP58499 235 aaPredicted RBP5.53□□□□□ -1.52
LMO3-220ENST00000539232 TAS2R46P59540 309 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 SELENOTP62341 195 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 IZUMO4Q1ZYL8 232 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 VMA21Q3ZAQ7 101 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 AADACL3Q5VUY0 350 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 OR4A47Q6IF82 309 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 ZNF66Q6ZN08 573 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 LHFPL1Q86WI0 220 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 OR10W1Q8NGF6 305 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 OR5H2Q8NGV7 314 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 OR4S2Q8NH73 311 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
LMO3-220ENST00000539232 MRGPRFQ96AM1 343 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 GNPNAT1Q96EK6 184 aaPredicted RBP5.53□□□□□ -1.52
LMO3-220ENST00000539232 FANCD2OSQ96PS1 177 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 HSD17B10Q99714 261 aaKnown RBP5.53□□□□□ -1.52
LMO3-220ENST00000539232 MIEN1Q9BRT3 115 aa5.53□□□□□ -1.52
LMO3-220ENST00000539232 TRBV9A0A0B4J1U6 114 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 A0A1B0GU03 582 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 IGLC7A0M8Q6 106 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 C20orf202A1L168 122 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 ZNF705GA8MUZ8 300 aaPredicted RBP5.52□□□□□ -1.53
LMO3-220ENST00000539232 BMPR1BO00238 502 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 UPK2O00526 184 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 OR2J3O76001 311 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 OR9G9P0C7N8 305 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 MFAP2P55001 183 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 HERV-K104P61576 105 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 RBX1P62877 108 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 RHOGP84095 191 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 TMEM267Q0VDI3 215 aaPredicted RBP5.52□□□□□ -1.53
LMO3-220ENST00000539232 PET117Q6UWS5 81 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 SSX7Q7RTT5 188 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 TCTEX1D1Q8N7M0 179 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 LRTM2Q8N967 370 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 TMEM170AQ8WVE7 144 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 DPF1Q92782 380 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 C20orf24Q9BUV8 137 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
LMO3-220ENST00000539232 C14orf166Q9Y224 244 aaKnown RBP5.52□□□□□ -1.53
LMO3-220ENST00000539232 LSM4Q9Y4Z0 139 aaKnown RBP5.52□□□□□ -1.53
LMO3-220ENST00000539232 IZUMO1RA6ND01 250 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 OVOL1O14753 267 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 SCAF4O95104 1147 aaKnown RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 KRASP01116 189 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 TYMSP04818 313 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 NPSP0C0P6 89 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 OR13C7P0DN81 318 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 G6PCP35575 357 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 RPL27AP46776 148 aaKnown RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 SYNJ2BPP57105 145 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 S100A10P60903 97 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 RPL8P62917 257 aaKnown RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 PAFAH1B2P68402 229 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 RPP30P78346 268 aaKnown RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 KLF5Q13887 457 aaPredicted RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 MSMO1Q15800 293 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 POU2AF1Q16633 256 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 ATP6V1FQ16864 119 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 IAH1Q2TAA2 248 aaPredicted RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 GFI1BQ5VTD9 330 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 ZNF343Q6P1L6 599 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 ACSM6Q6P461 480 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 MMD2Q8IY49 270 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 TTC9CQ8N5M4 171 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 MARCH1Q8TCQ1 289 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 TMEM230Q96A57 120 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 ZNF414Q96IQ9 312 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 CCDC140Q96MF4 163 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 ASCL2Q99929 193 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 C5orf66Q9H5L9 145 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 SEPSECSQ9HD40 501 aaKnown RBP5.51□□□□□ -1.53
LMO3-220ENST00000539232 SLC2A9Q9NRM0 540 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 FKBP11Q9NYL4 201 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 PLA2G2EQ9NZK7 142 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 NAGKQ9UJ70 344 aa5.51□□□□□ -1.53
LMO3-220ENST00000539232 TGIF2-C20orf24A0A0A6YYL0 155 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 IGHV3-21A0A0B4J1V1 117 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 TEX50A0A1B0GTY4 177 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 XKRY2A2RUG3 117 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 MPPED1O15442 326 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 RBFOX2O43251 390 aaKnown RBP eCLIP5.5□□□□□ -1.53
LMO3-220ENST00000539232 PITX3O75364 302 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 SAP30O75446 220 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 BRI3O95415 125 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 TOMM40O96008 361 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 IFNA1P01562 189 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 CTSDP07339 412 aaPredicted RBP5.5□□□□□ -1.53
LMO3-220ENST00000539232 CSN3P07498 182 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 RND3P61587 244 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 SUPT4H1P63272 117 aaKnown RBP5.5□□□□□ -1.53
LMO3-220ENST00000539232 ATP5G2Q06055 141 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 WT1-ASQ06250 92 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 BAXQ07812 192 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 ICAM4Q14773 271 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 TMEM183BQ1AE95 376 aa5.5□□□□□ -1.53
LMO3-220ENST00000539232 C15orf32Q32M92 178 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms