RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 BLNKQ8WV28 456 aa5.91□□□□□ -1.46
PRKAB1-204ENST00000538271 PECRQ9BY49 303 aa5.91□□□□□ -1.46
PRKAB1-204ENST00000538271 SLC25A39Q9BZJ4 359 aaPredicted RBP5.91□□□□□ -1.46
PRKAB1-204ENST00000538271 LPAR5Q9H1C0 372 aa5.91□□□□□ -1.46
PRKAB1-204ENST00000538271 OR2W1Q9Y3N9 320 aa5.91□□□□□ -1.46
PRKAB1-204ENST00000538271 TRAV26-2A0A0B4J265 109 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 BOLA2-SMG1P6H3BVE0 249 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 H7C1H1 209 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 GSTZ1O43708 216 aaPredicted RBP5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 DUSP14O95147 198 aaKnown RBP5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 IGHV3-30P01768 117 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 IGHV3-33P01772 117 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 IGHV3-30-3P0DP02 117 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 IGHV3-30-5P0DP03 117 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 QRFPP83859 136 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 DAZ2Q13117 558 aaKnown RBP5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 Q499Y3 187 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 RPL22L1Q6P5R6 122 aaKnown RBP5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 FAM89BQ8N5H3 189 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 NKAIN3Q8N8D7 197 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 LGALS14Q8TCE9 139 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 PGLYRP3Q96LB9 341 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 HHLA3Q9XRX5 114 aa5.9□□□□□ -1.46
PRKAB1-204ENST00000538271 USH2AO75445 5202 aa5.9□□□□□ -1.47
PRKAB1-204ENST00000538271 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 H7BYZ3 331 aa5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 RHODO00212 210 aa5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 TNFSF12O43508 249 aa5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 NFYAP23511 347 aaPredicted RBP5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 SLAQ13239 276 aa5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 FUT9Q9Y231 359 aa5.89□□□□□ -1.47
PRKAB1-204ENST00000538271 SULT1C2O00338 296 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 CCSO14618 274 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 PITX3O75364 302 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 SCGB2A1O75556 95 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 IGHV3-53P01767 116 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 RPS11P62280 158 aaKnown RBP eCLIP5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 GNGT1P63211 74 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 GAMTQ14353 236 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 OR6F1Q8NGZ6 308 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 OR4X1Q8NH49 305 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 Q8WTZ3 238 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 IL22RA2Q969J5 263 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 SLC29A1Q99808 456 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 BLOC1S6Q9UL45 172 aa5.88□□□□□ -1.47
PRKAB1-204ENST00000538271 IGKV1D-8A0A087WSZ0 117 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 TRAV8-3A0A0A6YYJ7 113 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 FAM231BA6NCW3 169 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 E5RGE8 158 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 IL4P05112 153 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 ZNF846Q147U1 533 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 CCDC58Q4VC31 144 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 OR1B1Q8NGR6 318 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 C7orf33Q8WU49 177 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 ST6GAL2Q96JF0 529 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 ATP6V1G3Q96LB4 118 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 URM1Q9BTM9 101 aaKnown RBP5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 CENPOQ9BU64 300 aa5.87□□□□□ -1.47
PRKAB1-204ENST00000538271 TRGV1A0A0A0MS02 117 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 HMGB1P1B2RPK0 211 aaPredicted RBP5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 ANKRD65E5RJM6 399 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 TAAR5O14804 337 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 SNAPC5O75971 98 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 ZNF182P17025 639 aaPredicted RBP5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 ERVK-16P61578 105 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 CIRBPQ14011 172 aaKnown RBP5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 HES5Q5TA89 166 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 DHFR2Q86XF0 187 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 CMTM5Q96DZ9 223 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 SMIM19Q96E16 107 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 DERL3Q96Q80 235 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 MRPL32Q9BYC8 188 aaKnown RBP5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 AAMDCQ9H7C9 122 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 FKBP11Q9NYL4 201 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 COMMD9Q9P000 198 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 PRNDQ9UKY0 176 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 KCNK7Q9Y2U2 307 aa5.86□□□□□ -1.47
PRKAB1-204ENST00000538271 TRAV30A0A087WSZ9 112 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 ATP6V1G2O95670 118 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 OR5AC1P0C628 307 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 PSG3Q16557 428 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 PIK3CD-AS1Q5SR53 167 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 C1orf100Q5SVJ3 147 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 PCNPQ8WW12 178 aaKnown RBP5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 TSC22D3Q99576 134 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 TXNDC17Q9BRA2 123 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 CCL28Q9NRJ3 127 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 PSORS1C2Q9UIG4 136 aa5.85□□□□□ -1.47
PRKAB1-204ENST00000538271 A0A087WYN8 130 aa5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 IGLC1P0CG04 106 aa5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 POLR2IP36954 125 aaKnown RBP5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 YPEL3P61236 119 aaPredicted RBP5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 RHOBP62745 196 aa5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 ERHP84090 104 aaKnown RBP5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 SAMD13Q5VXD3 122 aa5.84□□□□□ -1.47
PRKAB1-204ENST00000538271 SDIM1Q6ZPB5 146 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms