RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 SOX21Q9Y651 276 aaPredicted RBP5.26□□□□□ -1.57
USP28-206ENST00000538224 ITPR1Q14643 2758 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 IZUMO1RA6ND01 250 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 PGPA6NDG6 321 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 NCBP2LA6PVI3 153 aaKnown RBP5.25□□□□□ -1.57
USP28-206ENST00000538224 SNURFLB1AK76 121 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 OVOL3O00110 214 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 SLC17A3O00476 420 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 IGLV2-8P01709 118 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 APELAP0DMC3 54 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 CRISP2P16562 243 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 GNLYP22749 145 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 ADMP35318 185 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 PAFAH1B2P68402 229 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 OR5I1Q13606 314 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 JOSD1Q15040 202 aaPredicted RBP5.25□□□□□ -1.57
USP28-206ENST00000538224 C21orf62-AS1Q17RA5 79 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 PDZD11Q5EBL8 140 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 LDLRAD2Q5SZI1 272 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 GFI1BQ5VTD9 330 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 GBGT1Q8N5D6 347 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 OR4B1Q8NGF8 309 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 VN1R17PQ8TDU5 208 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 WIPF2Q8TF74 440 aaPredicted RBP5.25□□□□□ -1.57
USP28-206ENST00000538224 BLNKQ8WV28 456 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 PIMREGQ9BSJ6 248 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 SHANK2-AS3Q9BTD1 123 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 RNASE7Q9H1E1 156 aaKnown RBP5.25□□□□□ -1.57
USP28-206ENST00000538224 Q9H3A6 140 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 ZNF331Q9NQX6 463 aaPredicted RBP5.25□□□□□ -1.57
USP28-206ENST00000538224 SERTAD4Q9NUC0 356 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 C21orf62Q9NYP8 219 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 MRPL27Q9P0M9 148 aaKnown RBP5.25□□□□□ -1.57
USP28-206ENST00000538224 NAT8BQ9UHF3 227 aa5.25□□□□□ -1.57
USP28-206ENST00000538224 HIVEP3Q5T1R4 2406 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 A0A1B0GV90 55 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 WI2-2373I1.2A0A1W2PRP0 233 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 FAM231BA6NCW3 169 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 A8MWL6 223 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 TSTD3H0UI37 97 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 TCAPO15273 167 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 LTAP01374 205 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 IGKV1-17P01599 117 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 AMBPP02760 352 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 TCRAP04437 139 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 ESDP10768 282 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 CBLN1P23435 193 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 IER3P46695 156 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 RAB9AP51151 201 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 TPPP2P59282 170 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 LMO4P61968 165 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 PSG9Q00887 426 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 PRB3Q04118 309 aaPredicted RBP5.24□□□□□ -1.57
USP28-206ENST00000538224 Q0VG73 95 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 IQCJQ1A5X6 159 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 KLK9Q2XQG4 91 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 OR10J3Q5JRS4 329 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 Q86TA4 180 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 FAM110DQ8TAY7 271 aaPredicted RBP5.24□□□□□ -1.57
USP28-206ENST00000538224 TSKUQ8WUA8 353 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 MBD6Q96DN6 1003 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 ATP6V0BQ99437 205 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 BPESC1Q9GZL8 116 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 GFRA4Q9GZZ7 299 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 KLK9Q9UKQ9 250 aa5.24□□□□□ -1.57
USP28-206ENST00000538224 TPRP12270 2363 aaKnown RBP5.24□□□□□ -1.57
USP28-206ENST00000538224 PLXNB1O43157 2135 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 TRBV19A0A075B6N1 114 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 IGHV3-21A0A0B4J1V1 117 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 A0A1W2PPR1 153 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 BMPR1BO00238 502 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 NPFFO15130 113 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 CIDEAO60543 219 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 ZNF253O75346 499 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 NDUFB8O95169 186 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 P01737 135 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 IL4P05112 153 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 LINC00614P0C842 121 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 RPL7P18124 248 aaKnown RBP5.23□□□□□ -1.57
USP28-206ENST00000538224 ZFP36P26651 326 aaKnown RBP5.23□□□□□ -1.57
USP28-206ENST00000538224 SAA4P35542 130 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 UQCRFS1P47985 274 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 PKIAP61925 76 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 Q56UQ5 140 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 FAM162BQ5T6X4 162 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 CLEC2AQ6UVW9 174 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 TMEM136Q6ZRR5 245 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 C19orf35Q6ZS72 473 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 ZNF491Q8N8L2 437 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 Q8N9W7 124 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 TMEM75Q8N9X5 138 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 DAZAP1Q96EP5 407 aaKnown RBP5.23□□□□□ -1.57
USP28-206ENST00000538224 C14orf144Q96I85 54 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 FANCD2OSQ96PS1 177 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 TBX15Q96SF7 602 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 CCL19Q99731 98 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 MLST8Q9BVC4 326 aa5.23□□□□□ -1.57
USP28-206ENST00000538224 RPP21Q9H633 154 aaKnown RBP5.23□□□□□ -1.57
USP28-206ENST00000538224 C7orf69Q9H7B7 122 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms