RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TRGV5A0A0B4J1U4 118 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 IGHV3-64DA0A0J9YX35 117 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 CBY3A6NI87 242 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 SRRM5B3KS81 715 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 INS-IGF2F8WCM5 200 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 NUDT3O95989 172 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 IGHV1-2P23083 117 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
CPSF7-216ENST00000536548 RPL8P62917 257 aaKnown RBP6.29□□□□□ -1.4
CPSF7-216ENST00000536548 MAJINQ3KP22 176 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 MPV17L2Q567V2 206 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 C10orf113Q5VZT2 155 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 FAM71F2Q6NXP2 309 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 OR2T6Q8NHC8 308 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 FAM167A-AS1Q96KT0 104 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 DCTN5Q9BTE1 182 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 SSBP3Q9BWW4 388 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-216ENST00000536548 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 SCRT2Q9NQ03 307 aa6.29□□□□□ -1.4
CPSF7-216ENST00000536548 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 TEX50A0A1B0GTY4 177 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 HIGD1CA8MV81 97 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 CHEK1O14757 476 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 CA1P00915 261 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-216ENST00000536548 APOA2P02652 100 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 SAA2P0DJI9 122 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-216ENST00000536548 RNASE2P10153 161 aaKnown RBP6.28□□□□□ -1.4
CPSF7-216ENST00000536548 CAMPP49913 170 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 ARF6P62330 175 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 LDLRAD2Q5SZI1 272 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 FAM120AOSQ5T036 256 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 GDF5OSQ5U4N7 250 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 Q6ZT83 130 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 SSX8Q7RTT4 187 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 PDPNQ86YL7 162 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 RPRMLQ8N4K4 120 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 OR4A5Q8NH83 315 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 FAM168AQ92567 244 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 DPF1Q92782 380 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 DAZAP1Q96EP5 407 aaKnown RBP6.28□□□□□ -1.4
CPSF7-216ENST00000536548 PERPQ96FX8 193 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 FMC1Q96HJ9 113 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 GPR82Q96P67 336 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 AP1S3Q96PC3 154 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 NDFIP1Q9BT67 221 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 HES7Q9BYE0 225 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 CLEC5AQ9NY25 188 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 NOTCH1P46531 2555 aa6.28□□□□□ -1.4
CPSF7-216ENST00000536548 IGKV1D-17A0A075B6S4 117 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 KBTBD11-OT1A0A1B0GTJ5 212 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 A0A1B0GW15 77 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 TCRBV4S1A1TA0A5B7 111 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 PSMB11A5LHX3 300 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 A6NDN8 102 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 IGKV3-15P01624 115 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 P01737 135 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 TFF1P04155 84 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 SLC25A5P05141 298 aaKnown RBP6.27□□□□□ -1.41
CPSF7-216ENST00000536548 CGB3P0DN86 165 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 CGB7P0DN87 165 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 PSG1P11464 419 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 GPR183P32249 361 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 C17orf58Q2M2W7 97 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 CT45A1Q5HYN5 189 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 AMMECR1LQ6DCA0 310 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 RBPMS2Q6ZRY4 209 aaKnown RBP6.27□□□□□ -1.41
CPSF7-216ENST00000536548 Q6ZVH6 145 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 BPIFA4PQ86YQ2 179 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 TMEM178AQ8NBL3 297 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 MDS2Q8NDY4 140 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 OR9G1Q8NH87 305 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 CT45A3Q8NHU0 189 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 OSR1Q8TAX0 266 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-216ENST00000536548 Q96MF0 132 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 C7orf69Q9H7B7 122 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 KLF12Q9Y4X4 402 aa6.27□□□□□ -1.41
CPSF7-216ENST00000536548 LOC102724200A0A096LPH7 203 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-216ENST00000536548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.26□□□□□ -1.41
CPSF7-216ENST00000536548 MUC21A0A0G2JKD1 596 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 MUC21A0A140T8X8 626 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 AHRRA9YTQ3 701 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 PRRG2O14669 202 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 LYZL6O75951 148 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 COX8AP10176 69 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 MYCNOSP40205 109 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 GPR6P46095 362 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-216ENST00000536548 CSN1S1P47710 185 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 ZNF134P52741 427 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 PSG9Q00887 426 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 KRTAP24-1Q3LI83 254 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 PSMG4Q5JS54 123 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 RNFT1Q5M7Z0 435 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 Q5PR19 223 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 SPATA12Q7Z6I5 190 aa6.26□□□□□ -1.41
CPSF7-216ENST00000536548 FAM169BQ8N8A8 192 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms