RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 J3QR89 54 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 ZNF645Q8N7E2 425 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 SPINT2O43291 252 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 CCL8P80075 99 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
LIG1-203ENST00000536218 LIPFP07098 398 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 TNFAIP6P98066 277 aaPredicted RBP11.31□□□□□ -0.6
LIG1-203ENST00000536218 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 SS18L2Q9UHA2 77 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 HSPB8Q9UJY1 196 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 A6NJY4 79 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 C16orf97H3BN30 126 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 KALRNO60229 2985 aa11.31□□□□□ -0.6
LIG1-203ENST00000536218 OR9G9P0C7N8 305 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 FCGR2BP31994 310 aaPredicted RBP11.3□□□□□ -0.6
LIG1-203ENST00000536218 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 WIPF2Q8TF74 440 aaPredicted RBP11.3□□□□□ -0.6
LIG1-203ENST00000536218 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 ABCA4P78363 2273 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 A1L4Q6 167 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 P0C879 139 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 WFDC2Q14508 124 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 UTF1Q5T230 341 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 SH2D6Q7Z4S9 175 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 LINC00473A8K010 186 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 OR2J3O76001 311 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 BRWD1-AS2P59051 145 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 TMEM167BQ9NRX6 74 aa11.3□□□□□ -0.6
LIG1-203ENST00000536218 IGHV1-46P01743 117 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 HINT2Q9BX68 163 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 DSCAMO60469 2012 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 NCR2O95944 276 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 ETDBQ3ZM63 59 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 RASL11AQ6T310 242 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
LIG1-203ENST00000536218 GRAMD2BQ96HH9 432 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 CCL13Q99616 98 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 ZZEF1O43149 2961 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 NCOR2Q9Y618 2525 aa11.29□□□□□ -0.6
LIG1-203ENST00000536218 VWC2LB2RUY7 222 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 PPP1R35Q8TAP8 253 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 C15orf65H3BRN8 121 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 MGST3O14880 152 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 GCSHP23434 173 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 GPR12P47775 334 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 BSPH1Q075Z2 132 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
LIG1-203ENST00000536218 IGLV3-9A0A075B6K5 115 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 GATA3P23771 443 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 NMUP48645 174 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 RPL39P5Q59GN2 51 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
LIG1-203ENST00000536218 K7ENP7 123 aa11.27□□□□□ -0.6
LIG1-203ENST00000536218 K7ERJ3 54 aa11.27□□□□□ -0.6
LIG1-203ENST00000536218 FCGR3BO75015 233 aa11.27□□□□□ -0.6
LIG1-203ENST00000536218 HBBP68871 147 aa11.27□□□□□ -0.6
LIG1-203ENST00000536218 FAM90A1Q86YD7 464 aa11.27□□□□□ -0.6
LIG1-203ENST00000536218 SPTAN1Q13813 2472 aaKnown RBP11.27□□□□□ -0.61
LIG1-203ENST00000536218 FAM216BQ8N7L0 139 aa11.27□□□□□ -0.61
LIG1-203ENST00000536218 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
LIG1-203ENST00000536218 TRGV8A0A0C4DH27 118 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 ZNF134P52741 427 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 C1orf159Q96HA4 380 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 SPAG8Q99932 426 aaPredicted RBP11.26□□□□□ -0.61
LIG1-203ENST00000536218 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 KBTBD11-OT1A0A1B0GTJ5 212 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 CHEK1O14757 476 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 TCTEX1D4Q5JR98 221 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 MBD6Q96DN6 1003 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 COL12A1Q99715 3063 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 PROP1O75360 226 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 SHISA2Q6UWI4 295 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
LIG1-203ENST00000536218 TEX50A0A1B0GTY4 177 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 GFRA3O60609 400 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 LHBP01229 141 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 THBDP07204 575 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 FGF6P10767 208 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
LIG1-203ENST00000536218 RAXQ9Y2V3 346 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms