RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 HOXA3O43365 443 aaPredicted RBP16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 OR2C1O95371 312 aa16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 IL4P05112 153 aa16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 SRP14P37108 136 aaKnown RBP16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 UBE2L3P68036 154 aaKnown RBP16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 SIGLECL1Q8N7X8 197 aa16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 VPREB3Q9UKI3 123 aa16.32■□□□□ 0.2
PDXDC1-205ENST00000535621 F6UZH7 168 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 AP4M1O00189 453 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 ADMP35318 185 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 CBLN2Q8IUK8 224 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 STXBP6Q8NFX7 210 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 FXYD5Q96DB9 178 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 SMIM7Q9BQ49 75 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 CHRDL1Q9BU40 450 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 SLC25A39Q9BZJ4 359 aaPredicted RBP16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 AKR1C3P42330 323 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 RHEBQ15382 184 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 ZNF674Q2M3X9 581 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 Q8WTZ3 238 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 CCDC140Q96MF4 163 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 RPS10P5Q9NQ39 176 aa16.31■□□□□ 0.2
PDXDC1-205ENST00000535621 SCGB2A1O75556 95 aa16.3■□□□□ 0.2
PDXDC1-205ENST00000535621 LEMD1Q68G75 181 aa16.3■□□□□ 0.2
PDXDC1-205ENST00000535621 SDF2L1Q9HCN8 221 aa16.3■□□□□ 0.2
PDXDC1-205ENST00000535621 A0A1W2PRE2 83 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 BRI3O95415 125 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 CLEC3BP05452 202 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 GPR183P32249 361 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 EEF1AKMT3Q96AZ1 226 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 HIVEP2P31629 2446 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 FAM223BA6NKX1 122 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 NDUFB4O95168 129 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 USF2Q15853 346 aaPredicted RBP16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 FAM223AQ8IWN6 122 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 ZNF580Q9UK33 172 aa16.29■□□□□ 0.2
PDXDC1-205ENST00000535621 TRBV7-1A0A0A6YYK4 115 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 SCO2A0A1W2PP80 73 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 GGTLC3B5MD39 225 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 GP9P14770 177 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 ATP5G2Q06055 141 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 PNRC1Q12796 327 aaPredicted RBP16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 TEX29Q8N6K0 151 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 SHANK2-AS3Q9BTD1 123 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 GAR1Q9NY12 217 aaKnown RBP16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 NAT8Q9UHE5 227 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 H3BUA1 57 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 TRGV3P03979 118 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 ZNF343Q6P1L6 599 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 ZNF414Q96IQ9 312 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 DERL1Q9BUN8 251 aa16.28■□□□□ 0.2
PDXDC1-205ENST00000535621 H3BRN7 92 aa16.27■□□□□ 0.2
PDXDC1-205ENST00000535621 CFHR3Q02985 330 aa16.27■□□□□ 0.2
PDXDC1-205ENST00000535621 TMEM241Q24JQ0 296 aa16.27■□□□□ 0.2
PDXDC1-205ENST00000535621 CLEC19AQ6UXS0 136 aa16.27■□□□□ 0.2
PDXDC1-205ENST00000535621 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 C11orf52Q96A22 123 aa16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 IGLV1-40P01703 118 aa16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 SNRPCP09234 159 aaKnown RBP16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 SUMO1P63165 101 aaKnown RBP16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 ATP6V0BQ99437 205 aa16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 TMEM14CQ9P0S9 112 aa16.26■□□□□ 0.19
PDXDC1-205ENST00000535621 TPPP2P59282 170 aa16.25■□□□□ 0.19
PDXDC1-205ENST00000535621 ZNF600Q6ZNG1 722 aa16.25■□□□□ 0.19
PDXDC1-205ENST00000535621 NBEAP1P0C6P0 100 aa16.24■□□□□ 0.19
PDXDC1-205ENST00000535621 SMCO4Q9NRQ5 59 aa16.24■□□□□ 0.19
PDXDC1-205ENST00000535621 NF1P21359 2839 aa16.24■□□□□ 0.19
PDXDC1-205ENST00000535621 B4DEV8 164 aa16.24■□□□□ 0.19
PDXDC1-205ENST00000535621 TGOLN2O43493 480 aa16.24■□□□□ 0.19
PDXDC1-205ENST00000535621 KLK15Q9H2R5 256 aa16.24■□□□□ 0.19
PDXDC1-205ENST00000535621 IGHV3-35A0A0C4DH35 117 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 CD99P14209 185 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 BLNKQ8WV28 456 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 USMG5Q96IX5 58 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 ELOVL1Q9BW60 279 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 NSD1Q96L73 2696 aaPredicted RBP16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 A0A087WWC5 75 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 ZNF98A6NK75 572 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 CRYBB3P26998 211 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 MYCNOSP40205 109 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 RPL23P62829 140 aaKnown RBP16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 TOMM20LQ6UXN7 152 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 S100A7AQ86SG5 101 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 ESM1Q9NQ30 184 aa16.23■□□□□ 0.19
PDXDC1-205ENST00000535621 TRBV20OR9-2A0A075B6H5 130 aa16.22■□□□□ 0.19
PDXDC1-205ENST00000535621 PF4V1P10720 104 aa16.22■□□□□ 0.19
PDXDC1-205ENST00000535621 ADIRFQ15847 76 aa16.22■□□□□ 0.19
PDXDC1-205ENST00000535621 ZFAND3Q9H8U3 227 aa16.22■□□□□ 0.19
PDXDC1-205ENST00000535621 GNB4Q9HAV0 340 aa16.22■□□□□ 0.19
PDXDC1-205ENST00000535621 F8P00451 2351 aa16.22■□□□□ 0.19
PDXDC1-205ENST00000535621 HNF1AP20823 631 aa16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 RANP62826 216 aaKnown RBP16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 ZNF329Q86UD4 541 aa16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 BPIFA4PQ86YQ2 179 aa16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 PRSS22Q9GZN4 317 aa16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 TUBA4BQ9H853 241 aa16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 TMA7Q9Y2S6 64 aaKnown RBP16.21■□□□□ 0.19
PDXDC1-205ENST00000535621 HIST1H1EP10412 219 aaKnown RBP16.21■□□□□ 0.18
PDXDC1-205ENST00000535621 NPFFR1Q9GZQ6 430 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms