RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MTURNQ8N3F0 131 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 SPXQ9BT56 116 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 TMEM200BQ69YZ2 307 aa10.41□□□□□ -0.74
SPG11-203ENST00000535302 NACAE9PAV3 2078 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 TRAV3A0A0B4J244 114 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 D6R8Y8 96 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 YPEL1O60688 119 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 C5orf30Q96GV9 206 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 YPEL2Q96QA6 119 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 GREB1Q4ZG55 1949 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 IGLV3-12A0A075B6K2 115 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 IGKV1-27A0A075B6S5 117 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 LOC102723996A0A087X1L8 192 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.74
SPG11-203ENST00000535302 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 GGNQ86UU5 652 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 MST1P26927 711 aa10.4□□□□□ -0.74
SPG11-203ENST00000535302 ZNF362Q5T0B9 420 aaPredicted RBP10.4□□□□□ -0.74
SPG11-203ENST00000535302 C15orf32Q32M92 178 aa10.4□□□□□ -0.75
SPG11-203ENST00000535302 DTX2Q86UW9 622 aa10.4□□□□□ -0.75
SPG11-203ENST00000535302 BMPERQ8N8U9 685 aa10.4□□□□□ -0.75
SPG11-203ENST00000535302 DYSFO75923 2080 aa10.4□□□□□ -0.75
SPG11-203ENST00000535302 SIPA1L1O43166 1804 aa10.4□□□□□ -0.75
SPG11-203ENST00000535302 IGHV2-26A0A0B4J1V2 119 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 ANAPC10Q9UM13 185 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 COL4A6Q14031 1691 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 A8MWV9 139 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 WNT2P09544 360 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 SIGMAR1Q99720 223 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 SSBP2P81877 361 aaPredicted RBP10.39□□□□□ -0.75
SPG11-203ENST00000535302 MRPS18CQ9Y3D5 142 aaKnown RBP10.39□□□□□ -0.75
SPG11-203ENST00000535302 TRAV12-1A0A0B4J245 112 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 A0A0G2JNJ9 132 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 CD177Q8N6Q3 437 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 MS4A6AQ9H2W1 248 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 Q9UFV3 132 aa10.39□□□□□ -0.75
SPG11-203ENST00000535302 DUTP33316 252 aaKnown RBP10.38□□□□□ -0.75
SPG11-203ENST00000535302 KMT2EQ8IZD2 1858 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 GATA4P43694 442 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 LAGE3Q14657 143 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 C3orf56Q8N813 242 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 CLPSL1A2RUU4 121 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 NTN3O00634 580 aaPredicted RBP10.38□□□□□ -0.75
SPG11-203ENST00000535302 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
SPG11-203ENST00000535302 NEUROG3Q9Y4Z2 214 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 SCN5AQ14524 2016 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 F8WEM9 126 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 H0YIZ8 118 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 LHBP01229 141 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 HOXD3P31249 432 aaPredicted RBP10.38□□□□□ -0.75
SPG11-203ENST00000535302 HGFACQ04756 655 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 RS1O15537 224 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 E9PLN8 166 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 ZNF479Q96JC4 524 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
SPG11-203ENST00000535302 TRAV41A0A0B4J266 112 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 H3BUX3 64 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 EFNB3Q15768 340 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 TMEM144Q7Z5S9 345 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
SPG11-203ENST00000535302 PRR30Q53SZ7 412 aaPredicted RBP10.37□□□□□ -0.75
SPG11-203ENST00000535302 LCN12Q6JVE5 192 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 MSRB2Q9Y3D2 182 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 VWC2LB2RUY7 222 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 CSTL1Q9H114 145 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 PSPNO60542 156 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 LY6G6FQ5SQ64 297 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 ASPHD1Q5U4P2 390 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 RUSC1-AS1Q66K80 236 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 NDUFS5O43920 106 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 TIMP3P35625 211 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 ZNRD1Q9P1U0 126 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 MED12Q93074 2177 aa10.37□□□□□ -0.75
SPG11-203ENST00000535302 IL17RELQ6ZVW7 336 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 DOCK4Q8N1I0 1966 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 PFN2P35080 140 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
SPG11-203ENST00000535302 LYPD2Q6UXB3 125 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 DKK1O94907 266 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 IGHV3-38A0A0C4DH36 116 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
SPG11-203ENST00000535302 COL8A2P25067 703 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 NABP1Q96AH0 204 aa10.36□□□□□ -0.75
SPG11-203ENST00000535302 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
SPG11-203ENST00000535302 ATP5IP56385 69 aaPredicted RBP10.35□□□□□ -0.75
SPG11-203ENST00000535302 CRYGSP22914 178 aa10.35□□□□□ -0.75
SPG11-203ENST00000535302 PRCDQ00LT1 54 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms