RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	RLN1	P04808	185 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	HSMCR30	P0CW71	290 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	VPREB1	P12018	145 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	PTHLH	P12272	177 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	RAB3B	P20337	219 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	G6PC	P35575	357 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	EMP1	P54849	157 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	FXYD4	P59646	89 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	KRTAP10-12	P60413	245 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	FCN2	Q15485	313 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	TMEM17	Q86X19	198 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	ZNF709	Q8N972	641 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	PINX1	Q96BK5	328 aa	Known RBP	4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	MGLL	Q99685	303 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	CCDC90B	Q9GZT6	254 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	DUSP21	Q9H596	190 aa		4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.2	□□□□□ -1.74
PICALM-223	ENST00000534412	CORT	O00230	105 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	CLN5	O75503	358 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	IGKV1-17	P01599	117 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	HTN3	P15516	51 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	MYL9	P24844	172 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	LPAR6	P43657	344 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	NKX2-1	P43699	371 aa	Predicted RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	EIF2B2	P49770	351 aa	Known RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	PPP5C	P53041	499 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	AP2S1	P53680	142 aa	Predicted RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	SNRPD3	P62318	126 aa	Known RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	DHRS2	Q13268	280 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	C14orf177	Q52M58	125 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412		Q5VSD8	79 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	TPRA1	Q86W33	373 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	LYPD1	Q8N2G4	141 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	OR5AP2	Q8NGF4	316 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	MOB3A	Q96BX8	217 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	NARS2	Q96I59	477 aa	Known RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	SEC22A	Q96IW7	307 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	ATG101	Q9BSB4	218 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	NRN1	Q9NPD7	142 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	NDUFB11	Q9NX14	153 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	SCN3B	Q9NY72	215 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	MRPL36	Q9P0J6	103 aa	Known RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	DAPK2	Q9UIK4	370 aa		4.19	□□□□□ -1.74
PICALM-223	ENST00000534412	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.19	□□□□□ -1.74
PICALM-223	ENST00000534412		A0A0A6YYH2	397 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	TRDV1	A0A1B0GX56	115 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412		A6NJ64	397 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	XG	P55808	180 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	HSPE1	P61604	102 aa	Known RBP	4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	SNRPE	P62304	92 aa	Known RBP	4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	TTC32	Q5I0X7	151 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	GDF5OS	Q5U4N7	250 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	DHRS11	Q6UWP2	260 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	PRSS48	Q7RTY5	328 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	CMTM1	Q8IZ96	169 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	OR4X1	Q8NH49	305 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	OR52I2	Q8NH67	350 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	LGALS14	Q8TCE9	139 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	C18orf15	Q96N68	181 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412		Q9H3A6	140 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	RHBDL2	Q9NX52	303 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	LINC00588	Q9Y4M8	146 aa		4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	FLG2	Q5D862	2391 aa	Predicted RBP	4.18	□□□□□ -1.74
PICALM-223	ENST00000534412	IGHV3OR16-12	A0A075B7B8	117 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412		A0A1W2PPQ1	181 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	SCGB2A1	O75556	95 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	IGKV1-39	P01597	117 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	HBE1	P02100	147 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	IGKV1D-39	P04432	117 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	RNASE2	P10153	161 aa	Known RBP	4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	RPL5	P46777	297 aa	Known RBP	4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	CCL18	P55774	89 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	HERV-K104	P61576	105 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	DAD1	P61803	113 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	ERH	P84090	104 aa	Known RBP	4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	GAGE5	Q13069	117 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	GAGE6	Q13070	117 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	ZNF79	Q15937	498 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	BSX	Q3C1V8	233 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	ZNF876P	Q49A33	203 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	LCE1F	Q5T754	118 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	C22orf42	Q6IC83	251 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	FOXI2	Q6ZQN5	318 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	C1orf158	Q8N1D5	194 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	TSPAN14	Q8NG11	270 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	OR4A16	Q8NH70	328 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	THAP6	Q8TBB0	222 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	FRZB	Q92765	325 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	SLC25A38	Q96DW6	304 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	GFRA4	Q9GZZ7	299 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	FXYD6	Q9H0Q3	95 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	SAV1	Q9H4B6	383 aa	Predicted RBP	4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	AUNIP	Q9H7T9	357 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	ANAPC10	Q9UM13	185 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	TPRKB	Q9Y3C4	175 aa		4.17	□□□□□ -1.74
PICALM-223	ENST00000534412	TRAV18	A0A075B6X5	111 aa		4.16	□□□□□ -1.74
PICALM-223	ENST00000534412	TRAV30	A0A087WSZ9	112 aa		4.16	□□□□□ -1.74
PICALM-223	ENST00000534412	SMIM30	A4D0T7	59 aa		4.16	□□□□□ -1.74
PICALM-223	ENST00000534412	LYRM9	A8MSI8	78 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms