RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 KCNIP4Q6PIL6 250 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF705AQ6ZN79 300 aaPredicted RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 PRIMA1Q86XR5 153 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM252Q8N6L7 170 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 OR10W1Q8NGF6 305 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 OR1P1Q8NH06 330 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 SRSF12Q8WXF0 261 aaKnown RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BHQ93079 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 CIB3Q96Q77 187 aaPredicted RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BNQ99877 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BMQ99879 126 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 HSPB9Q9BQS6 159 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 SRSF8Q9BRL6 282 aaKnown RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 PSENENQ9NZ42 101 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 VPREB3Q9UKI3 123 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 WSB1Q9Y6I7 421 aa4.82□□□□□ -1.64
CMTM1-220ENST00000534143 FBN1P35555 2871 aaKnown RBP4.82□□□□□ -1.64
CMTM1-220ENST00000534143 A0A1W2PN81 502 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 IGSF23A1L1A6 192 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 SH2D7A6NKC9 451 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 C15orf62A8K5M9 175 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF705FA8MVS1 300 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 KCNAB3O43448 404 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 CRLF1O75462 422 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ACTL6BO94805 426 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 CNIH1O95406 144 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 SCGB1D1O95968 90 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 IGHG2P01859 326 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 TRGC2P03986 189 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF705DP0CH99 300 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF705BP0CI00 300 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 RNASE2P10153 161 aaKnown RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 CHRNA7P36544 502 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ATP5IP56385 69 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 FAM3BP58499 235 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 RPL23AP62750 156 aaKnown RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 GNB1P62873 340 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 BLCAPP62952 87 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ERHP84090 104 aaKnown RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 WT1-ASQ06250 92 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 SCGB2A2Q13296 93 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ELOBQ15370 118 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM183BQ1AE95 376 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 KLK9Q2XQG4 91 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 C19orf54Q5BKX5 351 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM14EPQ6UXP3 125 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM182Q6ZP80 229 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 HAPLN4Q86UW8 402 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 OR2C3Q8N628 320 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 OR2D3Q8NGH3 330 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 OR10G4Q8NGN3 311 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 Q8WTZ3 238 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM170AQ8WVE7 144 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ARPC1AQ92747 370 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 OR4C12Q96R67 309 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 HIST1H2BLQ99880 126 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 HINT2Q9BX68 163 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 SMIM3Q9BZL3 60 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 HIPK2Q9H2X6 1198 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 SRD5A3Q9H8P0 318 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 PLEKHA3Q9HB20 300 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ESM1Q9NQ30 184 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 HEYLQ9NQ87 328 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 TNFRSF19Q9NS68 423 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 LYRM2Q9NU23 88 aaPredicted RBP4.81□□□□□ -1.64
CMTM1-220ENST00000534143 KLK9Q9UKQ9 250 aa4.81□□□□□ -1.64
CMTM1-220ENST00000534143 ANK2Q01484 3957 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 JMJD1CQ15652 2540 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 HIVEP2P31629 2446 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 TRBV24-1A0A075B6N3 115 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 C20orf202A1L168 122 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 XKRY2A2RUG3 117 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 DNAJC9-AS1A6NH13 148 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 H3BP45 60 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ATP6V0E1O15342 81 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 IFNA5P01569 189 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 IGF1P05019 195 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 CRYGCP07315 174 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 GYPEP15421 78 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 AREGP15514 252 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 MFAP2P55001 183 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 HILS1P60008 231 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 EWSR1Q01844 656 aaKnown RBP eCLIP4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ARL16Q0P5N6 197 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 C2orf83Q53S99 150 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 CT83Q5H943 113 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF506Q5JVG8 444 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 SPANXN5Q5MJ07 72 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 LEMD1Q68G75 181 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 Q8N2B8 174 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 TTC9CQ8N5M4 171 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 SLC24A4Q8NFF2 622 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 OR5T1Q8NG75 326 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 OR2G3Q8NGZ4 309 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 SGMS2Q8NHU3 365 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF418Q8TF45 676 aaPredicted RBP4.8□□□□□ -1.64
CMTM1-220ENST00000534143 P2RX4Q99571 388 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 FAM103A1Q9BTL3 118 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms