RNA–Protein interactions for RNA: ENST00000533567.5

TPT1-213, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3

Gene TPT1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-213ENST00000533567 RTL8BQ17RB0 113 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 NMSQ5H8A3 153 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 HES3Q5TGS1 186 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 PLPP4Q5VZY2 271 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 TMEM179BQ7Z7N9 219 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 TRAPPC6BQ86SZ2 158 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 SMIM29Q86T20 159 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 SFTPA2Q8IWL1 248 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 MSRB3Q8IXL7 192 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 LINC00311Q8N616 119 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 NEXN-AS1Q8NBZ9 246 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 OR2T10Q8NGZ9 312 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 MRPL30Q8TCC3 161 aaKnown RBP3.12□□□□□ -1.91
TPT1-213ENST00000533567 RPS4Y2Q8TD47 263 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 PPP1R1CQ8WVI7 109 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 COPS9Q8WXC6 57 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 LSM10Q969L4 123 aaKnown RBP3.12□□□□□ -1.91
TPT1-213ENST00000533567 FAM19A4Q96LR4 140 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 LINC00479Q96M42 142 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 SHANK2-AS3Q9BTD1 123 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 CST11Q9H112 138 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 C16orf95Q9H693 158 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 SCRT2Q9NQ03 307 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 OTORQ9NRC9 128 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 ABRACLQ9P1F3 81 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 PCTPQ9UKL6 214 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 VSIG4Q9Y279 399 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 AMMECR1Q9Y4X0 333 aaPredicted RBP3.12□□□□□ -1.91
TPT1-213ENST00000533567 TJP1Q07157 1748 aa3.12□□□□□ -1.91
TPT1-213ENST00000533567 ALPK3Q96L96 1907 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 COL5A3P25940 1745 aaPredicted RBP3.11□□□□□ -1.91
TPT1-213ENST00000533567 SMIM26A0A096LP01 95 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 RBAKDNA6NC62 111 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 C8orf87E5RJ46 101 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 E9PLD3 99 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 C11orf98E9PRG8 122 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 K7N7A8 449 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 NUPR1O60356 82 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 SERF1AO75920 110 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 EPPINO95925 133 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 APOHP02749 345 aaPredicted RBP3.11□□□□□ -1.91
TPT1-213ENST00000533567 RBP4P02753 201 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 SUB1P53999 127 aaKnown RBP eCLIP3.11□□□□□ -1.916e-42■■■■□ 21.4
TPT1-213ENST00000533567 RPS11P62280 158 aaKnown RBP eCLIP3.11□□□□□ -1.91
TPT1-213ENST00000533567 FKBP1AP62942 108 aaKnown RBP3.11□□□□□ -1.91
TPT1-213ENST00000533567 HBG1P69891 147 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 HBG2P69892 147 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 QRFPP83859 136 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 SP6Q3SY56 376 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 ZNF493Q6ZR52 646 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 DNM1P46Q6ZS02 220 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 RFLNAQ6ZTI6 216 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 SH2D6Q7Z4S9 175 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 TEN1Q86WV5 123 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 BPIFA4PQ86YQ2 179 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 OR2T6Q8NHC8 308 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 NABP1Q96AH0 204 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 RBMXL1Q96E39 390 aaKnown RBP3.11□□□□□ -1.91
TPT1-213ENST00000533567 ZC2HC1AQ96GY0 325 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 KCNS1Q96KK3 526 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 GPX7Q96SL4 187 aaPredicted RBP3.11□□□□□ -1.91
TPT1-213ENST00000533567 NMES1Q9C002 83 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 AICDAQ9GZX7 198 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 OCIAD1Q9NX40 245 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 RBM12B-AS1Q9P1G2 102 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 TP53TG3Q9ULZ0 132 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 ZNF835Q9Y2P0 537 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 CACNA1BQ00975 2339 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 DSPPQ9NZW4 1301 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 PLXNA4Q9HCM2 1894 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 ATRXP46100 2492 aa3.11□□□□□ -1.91
TPT1-213ENST00000533567 PAPPA2Q9BXP8 1791 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 LAMA4Q16363 1823 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 PLAC8L1A1L4L8 177 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 FAM24AA6NFZ4 105 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 A8MWL6 223 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 A8MWV9 139 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 CDX4O14627 284 aaPredicted RBP3.1□□□□□ -1.91
TPT1-213ENST00000533567 SSSCA1O60232 199 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 ZNF324O75467 553 aaPredicted RBP3.1□□□□□ -1.91
TPT1-213ENST00000533567 ATP1B1P05026 303 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 SMIM13P0DJ93 91 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 COX8AP10176 69 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 CRISP2P16562 243 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 MPV17P39210 176 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 INSL3P51460 131 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 SNRPGP62308 76 aaKnown RBP3.1□□□□□ -1.91
TPT1-213ENST00000533567 SSBP1Q04837 148 aaKnown RBP3.1□□□□□ -1.91
TPT1-213ENST00000533567 ELOCQ15369 112 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 PVRIGQ6DKI7 326 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 KCTD18Q6PI47 426 aaPredicted RBP3.1□□□□□ -1.91
TPT1-213ENST00000533567 SCGB1D4Q6XE38 83 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 DGAT2L6Q6ZPD8 337 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 C2orf91Q6ZV80 131 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
TPT1-213ENST00000533567 SRXN1Q9BYN0 137 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms