RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 HOXB4P17483 251 aaPredicted RBP15.26■□□□□ 0.03
UBXN1-215ENST00000533476 ZFP36P26651 326 aaKnown RBP15.26■□□□□ 0.03
UBXN1-215ENST00000533476 HES1Q14469 280 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 FBLN7Q53RD9 439 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 MINOS1Q5TGZ0 78 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 RASL11AQ6T310 242 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 C5orf17Q8NAS9 161 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 IGFBPL1Q8WX77 278 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 SERTAD4Q9NUC0 356 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 MINOS1-NBL1R4GNA1 71 aa15.26■□□□□ 0.03
UBXN1-215ENST00000533476 HLA-DQA1P01909 254 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 AMY1AP04745 511 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 CD24P25063 80 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 TCL1AP56279 114 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 UBE2G1P62253 170 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 LEMD1Q68G75 181 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 BAGE3Q86Y29 109 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 ITLN2Q8WWU7 325 aaPredicted RBP15.25■□□□□ 0.03
UBXN1-215ENST00000533476 MBD6Q96DN6 1003 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 ATG101Q9BSB4 218 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 SLC25A39Q9BZJ4 359 aaPredicted RBP15.25■□□□□ 0.03
UBXN1-215ENST00000533476 C7orf69Q9H7B7 122 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 MRPL27Q9P0M9 148 aaKnown RBP15.25■□□□□ 0.03
UBXN1-215ENST00000533476 ARHGAP32A7KAX9 2087 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 A0A1B0GV90 55 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 IZUMO1RA6ND01 250 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 Q6ZWC4 215 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 Q8N6K4 173 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 UBTD1Q9HAC8 227 aa15.25■□□□□ 0.03
UBXN1-215ENST00000533476 CFAP46Q8IYW2 2715 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 NPIPB5A8MRT5 1133 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 DYNAPQ8N1N2 210 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 FAM103A1Q9BTL3 118 aaKnown RBP15.24■□□□□ 0.03
UBXN1-215ENST00000533476 CHRDL1Q9BU40 450 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 SIRPDQ9H106 197 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 Q9H3A6 140 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 NAT8BQ9UHF3 227 aa15.24■□□□□ 0.03
UBXN1-215ENST00000533476 NDUFS7O75251 213 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 EFNA4P52798 201 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 EBI3Q14213 229 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 ZNF562Q6V9R5 426 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 TEX43Q6ZNM6 134 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 WIPF2Q8TF74 440 aaPredicted RBP15.23■□□□□ 0.03
UBXN1-215ENST00000533476 GRAMD2BQ96HH9 432 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 FMC1Q96HJ9 113 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 BBC3Q96PG8 261 aaPredicted RBP15.23■□□□□ 0.03
UBXN1-215ENST00000533476 RBM14Q96PK6 669 aaKnown RBP15.23■□□□□ 0.03
UBXN1-215ENST00000533476 TBX15Q96SF7 602 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 BRS3P32247 399 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 NUDT10Q8NFP7 164 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 TMEM190Q8WZ59 177 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 ARPC1AQ92747 370 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 NUDT11Q96G61 164 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 OTORQ9NRC9 128 aa15.23■□□□□ 0.03
UBXN1-215ENST00000533476 ZNF705FA8MVS1 300 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-215ENST00000533476 SPINK4O60575 86 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 TOMM40O96008 361 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 PRB1P04280 392 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 ZNF705DP0CH99 300 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-215ENST00000533476 ZNF705BP0CI00 300 aaPredicted RBP15.22■□□□□ 0.03
UBXN1-215ENST00000533476 HIST1H1EP10412 219 aaKnown RBP15.22■□□□□ 0.03
UBXN1-215ENST00000533476 MRPL52Q86TS9 123 aaKnown RBP15.22■□□□□ 0.03
UBXN1-215ENST00000533476 FAM168AQ92567 244 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 TMEM68Q96MH6 324 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 GPR82Q96P67 336 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 C20orf144Q9BQM9 153 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 HSPB9Q9BQS6 159 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 GNB4Q9HAV0 340 aa15.22■□□□□ 0.03
UBXN1-215ENST00000533476 CA1P00915 261 aaPredicted RBP15.21■□□□□ 0.03
UBXN1-215ENST00000533476 TCRAP04437 139 aa15.21■□□□□ 0.03
UBXN1-215ENST00000533476 SLC35B1P78383 322 aa15.21■□□□□ 0.03
UBXN1-215ENST00000533476 ASPHD1Q5U4P2 390 aa15.21■□□□□ 0.03
UBXN1-215ENST00000533476 ZNF48Q96MX3 618 aaPredicted RBP15.21■□□□□ 0.03
UBXN1-215ENST00000533476 SHANK2-AS3Q9BTD1 123 aa15.21■□□□□ 0.03
UBXN1-215ENST00000533476 MLST8Q9BVC4 326 aa15.21■□□□□ 0.03
UBXN1-215ENST00000533476 IGLV11-55A0A075B6I3 123 aa15.21■□□□□ 0.02
UBXN1-215ENST00000533476 IGHV2-70DA0A0C4DH43 119 aa15.21■□□□□ 0.02
UBXN1-215ENST00000533476 GPX1P07203 203 aa15.21■□□□□ 0.02
UBXN1-215ENST00000533476 ZNF586Q9NXT0 402 aa15.21■□□□□ 0.02
UBXN1-215ENST00000533476 RPH3ALQ9UNE2 315 aa15.21■□□□□ 0.02
UBXN1-215ENST00000533476 HIVEP3Q5T1R4 2406 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 H3BRN7 92 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 H3BTX0 84 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 LTAP01374 205 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 UQCRFS1P47985 274 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 USF2Q15853 346 aaPredicted RBP15.2■□□□□ 0.02
UBXN1-215ENST00000533476 MRPL54Q6P161 138 aaKnown RBP15.2■□□□□ 0.02
UBXN1-215ENST00000533476 TTC9CQ8N5M4 171 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 SIGLECL1Q8N7X8 197 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 FANCD2OSQ96PS1 177 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 SAMD10Q9BYL1 202 aa15.2■□□□□ 0.02
UBXN1-215ENST00000533476 TBL2Q9Y4P3 447 aaKnown RBP15.2■□□□□ 0.02
UBXN1-215ENST00000533476 TRAV30A0A087WSZ9 112 aa15.19■□□□□ 0.02
UBXN1-215ENST00000533476 NDPQ00604 133 aa15.19■□□□□ 0.02
UBXN1-215ENST00000533476 KLF17Q5JT82 389 aaPredicted RBP15.19■□□□□ 0.02
UBXN1-215ENST00000533476 PRR27Q6MZM9 219 aa15.19■□□□□ 0.02
UBXN1-215ENST00000533476 ZNF331Q9NQX6 463 aaPredicted RBP15.19■□□□□ 0.02
UBXN1-215ENST00000533476 NCBP2LA6PVI3 153 aaKnown RBP15.19■□□□□ 0.02
UBXN1-215ENST00000533476 ZNF491Q8N8L2 437 aa15.19■□□□□ 0.02
UBXN1-215ENST00000533476 TSKUQ8WUA8 353 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms