RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 PRRC2AP48634 2157 aaKnown RBP17.04■□□□□ 0.32
AP004608.1-202ENST00000533390 TRBV20OR9-2A0A075B6H5 130 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 CRYBA1P05813 215 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 SNRPCP09234 159 aaKnown RBP17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 GPR183P32249 361 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 RANP62826 216 aaKnown RBP17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 BPIFA4PQ86YQ2 179 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 MLXQ9UH92 298 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 CSMD2Q7Z408 3487 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 SVEP1Q4LDE5 3571 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 NAV2Q8IVL1 2488 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 PGPEP1LA6NFU8 196 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 H7BYZ3 331 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 FSHBP01225 129 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 ELOBQ15370 118 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 USF2Q15853 346 aaPredicted RBP17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 ZNF343Q6P1L6 599 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 ZNF329Q86UD4 541 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 C2CD4CQ8TF44 421 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 YPEL4Q96NS1 127 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 TCEAL7Q9BRU2 100 aa17.03■□□□□ 0.32
AP004608.1-202ENST00000533390 TRBV7-1A0A0A6YYK4 115 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 FAM223BA6NKX1 122 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 RAB5AP20339 215 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 ATP5G2Q06055 141 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 FAM223AQ8IWN6 122 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 CHRDL1Q9BU40 450 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 AURKAIP1Q9NWT8 199 aaPredicted RBP17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 RNF24Q9Y225 148 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 LY96Q9Y6Y9 160 aa17.02■□□□□ 0.32
AP004608.1-202ENST00000533390 ABCA12Q86UK0 2595 aa17.02■□□□□ 0.31
AP004608.1-202ENST00000533390 CENPEQ02224 2701 aa17.02■□□□□ 0.31
AP004608.1-202ENST00000533390 AP4M1O00189 453 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 IGHV4-59P01825 116 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 HIST1H1EP10412 219 aaKnown RBP17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 FOLR2P14207 255 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 ADMP35318 185 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 IER3P46695 156 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 BLCAPP62952 87 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 C9orf139Q6ZV77 190 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 OR5R1Q8NH85 324 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 OCC1Q8TAD7 63 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 CLEC3BP05452 202 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 S100A7P31151 101 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 GNG4P50150 75 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 OR4F17Q8NGA8 305 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 OR5B12Q96R08 314 aa17.01■□□□□ 0.31
AP004608.1-202ENST00000533390 PGPA6NDG6 321 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 ZNF98A6NK75 572 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 TRGV3P03979 118 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 SLC25A5P05141 298 aaKnown RBP17■□□□□ 0.31
AP004608.1-202ENST00000533390 CD99P14209 185 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 CNN1P51911 297 aaKnown RBP17■□□□□ 0.31
AP004608.1-202ENST00000533390 CLEC19AQ6UXS0 136 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 GNB4Q9HAV0 340 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 CSPG4Q6UVK1 2322 aa17■□□□□ 0.31
AP004608.1-202ENST00000533390 H3BUA1 57 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 PPP1R2P9O14990 202 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 HNF1AP20823 631 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 MYCNOSP40205 109 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 CENPWQ5EE01 88 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 WFDC11Q8NEX6 87 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 CCDC140Q96MF4 163 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 RABAC1Q9UI14 185 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 TENM4Q6N022 2769 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 BMPR1BO00238 502 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 PEX7O00628 323 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 S100PP25815 95 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 NOL4LQ96MY1 436 aaPredicted RBP16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 ATP6V0BQ99437 205 aa16.99■□□□□ 0.31
AP004608.1-202ENST00000533390 TGOLN2O43493 480 aa16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 PPIFP30405 207 aaKnown RBP16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 GALR1P47211 349 aa16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 SFRP2Q96HF1 295 aa16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 Q9H3A6 140 aa16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 ZNF586Q9NXT0 402 aa16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 CSMD1Q96PZ7 3565 aa16.98■□□□□ 0.31
AP004608.1-202ENST00000533390 H3BTX0 84 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 BRI3O95415 125 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 TPPP2P59282 170 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 TAS2R60P59551 318 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 EPDR1Q9UM22 224 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 MAP1AP78559 2803 aaPredicted RBP16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 TGIF2-C20orf24A0A0A6YYL0 155 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 C1orf196B1AJZ1 125 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 CXCL1P09341 107 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 C5orf17Q8NAS9 161 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 CDC42EP3Q9UKI2 254 aa16.97■□□□□ 0.31
AP004608.1-202ENST00000533390 LOC105371267A0A1B0GV96 52 aa16.96■□□□□ 0.31
AP004608.1-202ENST00000533390 RAB5BP61020 215 aa16.96■□□□□ 0.31
AP004608.1-202ENST00000533390 FLI1Q01543 452 aaPredicted RBP16.96■□□□□ 0.31
AP004608.1-202ENST00000533390 Q6YL49 198 aa16.96■□□□□ 0.31
AP004608.1-202ENST00000533390 Q6ZS46 218 aa16.96■□□□□ 0.31
AP004608.1-202ENST00000533390 OTORQ9NRC9 128 aa16.96■□□□□ 0.31
AP004608.1-202ENST00000533390 IGHV3-35A0A0C4DH35 117 aa16.95■□□□□ 0.3
AP004608.1-202ENST00000533390 RPS10P46783 165 aaKnown RBP16.95■□□□□ 0.3
AP004608.1-202ENST00000533390 RELQ04864 619 aaPredicted RBP16.95■□□□□ 0.3
AP004608.1-202ENST00000533390 TEX38Q6PEX7 206 aa16.95■□□□□ 0.3
AP004608.1-202ENST00000533390 VPREB3Q9UKI3 123 aa16.95■□□□□ 0.3
AP004608.1-202ENST00000533390 APCP25054 2843 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms